Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_N06
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93382-3|CAB07613.1| 292|Caenorhabditis elegans Hypothetical pr... 84 8e-17
Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 33 0.26
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 33 0.26
Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL021175-2|CAA15966.1| 322|Caenorhabditis elegans Hypothetical ... 28 5.5
Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 7.3
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 7.3
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 7.3
Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical pr... 27 9.7
U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein. 27 9.7
>Z93382-3|CAB07613.1| 292|Caenorhabditis elegans Hypothetical
protein F45G2.4 protein.
Length = 292
Score = 84.2 bits (199), Expect = 8e-17
Identities = 58/209 (27%), Positives = 94/209 (44%)
Frame = -3
Query: 655 ANKSAIVADIDARVAKGTELSNEIXLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQ 476
A K I+A++ VA + +EI ++AATI D + A + + E LE RA +
Sbjct: 82 AAKKKILAEVQEEVAS-RNIKSEIAAVLAATILNEADLSQDAFRAVSRFEGLEARASKVF 140
Query: 475 CLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXX 296
L+ MN+ LA ++K + I++D TL+QLA A + ++DA Y E+S+
Sbjct: 141 ILIKMNKRKLAIGEVKKMNQIDEDATLSQLANALVTSFGASGKVKDALYIYSEMSDKYGR 200
Query: 295 XXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPPEVSARY 116
+ AE+ L A R + K +V R+
Sbjct: 201 TTDLEMHQAVVSILTQD-YAAAEELLESALERDNKDADVLINSIVSAQLNEKDDDVVERF 259
Query: 115 LAQLLDSHPQHPFVKEYKAKTDEFQRLAA 29
++QL HP HP+V ++ K EF R+A+
Sbjct: 260 ISQLKHEHPNHPWVIDFNEKEAEFDRVAS 288
>Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical
protein F44A6.1b protein.
Length = 467
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 142 KPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQ 20
K ++ A +A +D PQ F K +KAK DE +RL Q +
Sbjct: 96 KEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIE 136
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical
protein F44A6.1a protein.
Length = 453
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 142 KPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQ 20
K ++ A +A +D PQ F K +KAK DE +RL Q +
Sbjct: 96 KEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIE 136
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 142 KPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQ 20
K ++ A +A +D PQ F K +KAK DE +RL Q +
Sbjct: 99 KEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIE 139
>Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical
protein C07E3.8 protein.
Length = 294
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 550 EDNYEAALKILHNAESLELRAFTLQCLLAMNR 455
E +E + H+ ESLE+ +FT+ CLL NR
Sbjct: 117 EGVFETPFEKPHHFESLEITSFTIDCLLYGNR 148
>AL021175-2|CAA15966.1| 322|Caenorhabditis elegans Hypothetical
protein Y6E2A.2 protein.
Length = 322
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 112 AQLLDSHPQHPFVKEYKAKTDEFQRLAAQY 23
+QL D H F+K Y K D+F +AQY
Sbjct: 158 SQLKDLHVYPEFLKSYCLKPDDFAYASAQY 187
>Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical
protein F11A3.1 protein.
Length = 544
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 274 GRPDQVPMNRDVQIAPSRCSVHLGYQGRPELDSATLV 384
G + P+N+ +I ++ LGY GRPE ++T++
Sbjct: 380 GTDREQPVNQRGEICVRGPTIMLGYLGRPEATASTVI 416
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 302 RFIGTWSGLPRCWGCSCQR 246
R + + G P C+GCSC R
Sbjct: 1540 RCLAGFYGFPHCYGCSCNR 1558
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 302 RFIGTWSGLPRCWGCSCQR 246
R + + G P C+GCSC R
Sbjct: 1540 RCLAGFYGFPHCYGCSCNR 1558
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 302 RFIGTWSGLPRCWGCSCQR 246
R + + G P C+GCSC R
Sbjct: 1540 RCLAGFYGFPHCYGCSCNR 1558
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 302 RFIGTWSGLPRCWGCSCQR 246
R + + G P C+GCSC R
Sbjct: 1540 RCLAGFYGFPHCYGCSCNR 1558
>Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical
protein F45G2.6 protein.
Length = 462
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 204 PAPHSTPTCCSALRSPRRISGNHRRCR 124
PA + P C ALR P +++ +H CR
Sbjct: 13 PADCTCPICEQALRDPIKLNCDHHYCR 39
>U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical
protein T13C5.4 protein.
Length = 220
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -3
Query: 598 LSNEIXLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAM 461
LSN + +I+ A E+NYE+ + NAES +L TL L ++
Sbjct: 170 LSNTLNMIINANKNASENNYESEDQF--NAESAKLLMLTLSNLFSL 213
>AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein.
Length = 462
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 204 PAPHSTPTCCSALRSPRRISGNHRRCR 124
PA + P C ALR P +++ +H CR
Sbjct: 13 PADCTCPICEQALRDPIKLNCDHHYCR 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,695,367
Number of Sequences: 27780
Number of extensions: 289023
Number of successful extensions: 850
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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