Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_M24
         (631 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal prot...   248   4e-66
AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p pro...   248   4e-66
AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA...   248   4e-66
BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p pro...    35   0.079
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P...    29   5.2  

>X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal protein
           L18a protein.
          Length = 177

 Score =  248 bits (608), Expect = 4e-66
 Identities = 118/156 (75%), Positives = 128/156 (82%)
 Frame = -3

Query: 542 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 363
           M+AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60

Query: 362 IVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 183
           IV             KNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61  IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120

Query: 182 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIXIPIAQ 75
           AHSIQIIKV+ I AA  RR  VKQFH+S I  P+ Q
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQ 156


>AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p
           protein.
          Length = 177

 Score =  248 bits (608), Expect = 4e-66
 Identities = 118/156 (75%), Positives = 128/156 (82%)
 Frame = -3

Query: 542 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 363
           M+AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60

Query: 362 IVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 183
           IV             KNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61  IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120

Query: 182 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIXIPIAQ 75
           AHSIQIIKV+ I AA  RR  VKQFH+S I  P+ Q
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQ 156


>AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA
           protein.
          Length = 177

 Score =  248 bits (608), Expect = 4e-66
 Identities = 118/156 (75%), Positives = 128/156 (82%)
 Frame = -3

Query: 542 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 363
           M+AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60

Query: 362 IVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 183
           IV             KNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61  IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120

Query: 182 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIXIPIAQ 75
           AHSIQIIKV+ I AA  RR  VKQFH+S I  P+ Q
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQ 156


>BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p
           protein.
          Length = 328

 Score = 35.1 bits (77), Expect = 0.079
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -3

Query: 542 MKAKGQLREYEVIGRKLP 489
           M+AKG L+EYEV+GRKLP
Sbjct: 1   MRAKGLLKEYEVVGRKLP 18


>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
            isoform A protein.
          Length = 2190

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -2

Query: 195  TQSPSSLNTDYQSGSNQGCCVSPSTGQTVPQQHHXDSHCPNVCTTTRDLIPSRI 34
            TQS +  NT + +  +     + S   T P Q+   S  PN  TT+    PS I
Sbjct: 1973 TQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSI 2026


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,418,235
Number of Sequences: 53049
Number of extensions: 609593
Number of successful extensions: 1779
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)