Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_M22
         (721 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...   140   4e-35
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    28   0.25 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    26   1.0  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    26   1.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   1.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   1.8  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    25   2.4  
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    23   7.2  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   7.2  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   9.5  
AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding pr...    23   9.5  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score =  140 bits (339), Expect = 4e-35
 Identities = 68/108 (62%), Positives = 77/108 (71%)
 Frame = -1

Query: 721 NPTXATIXXXXXXXXXXXXXXXXXEFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLM 542
           NPT   I                 EFLPI+SQ KK+K+QG +EDFLECLKLYDKNE+G M
Sbjct: 43  NPTIELIGKMGGTQKRGEKKIKFEEFLPIFSQVKKEKEQGCFEDFLECLKLYDKNEDGTM 102

Query: 541 LGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 398
           L AELTH+L ALGE+LDD E+  V KDCMDPEDDDG IPYA FLKK+M
Sbjct: 103 LLAELTHSLTALGERLDDVELDNVMKDCMDPEDDDGNIPYAPFLKKMM 150


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -3

Query: 227 PSHVDIPYNILDTDKPLFYT-NNIISTVLYNF 135
           P+  DI + I+   K LFYT N I+ TVL +F
Sbjct: 217 PTETDITFYIIIRRKTLFYTVNLILPTVLISF 248


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 221 HVDIPYNILDTDKPLFYTNNII 156
           ++DI +NI    K LFYT NII
Sbjct: 230 YLDITFNITMRRKTLFYTVNII 251


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 221 HVDIPYNILDTDKPLFYTNNII 156
           ++DI +NI    K LFYT NII
Sbjct: 230 YLDITFNITMRRKTLFYTVNII 251


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 505  GEKLDDSEVAEVTKDCMDPEDDDG 434
            G K+++  +AEV K  +D EDD G
Sbjct: 1250 GLKMENGVIAEVEKSQVDGEDDTG 1273



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 472  LQRLHCRQASHLVQEACV*AQRQA*DRFRSCHTASD 579
            ++RL C +   LV+E     +R+  DRF   H  S+
Sbjct: 1783 IKRLSCAEICQLVKERARAKRREDVDRFDLQHADSN 1818


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 221 HVDIPYNILDTDKPLFYTNNII 156
           ++DI +NI    K LFYT N+I
Sbjct: 226 YLDITFNITMRRKTLFYTVNLI 247


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 239 PARAPSHVDIPYNILDTDKPLFYTNNII 156
           P  A  + DI +NI    K LFYT N+I
Sbjct: 233 PCCAEPYPDIFFNITLRRKTLFYTVNLI 260


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 535 AELTHTLLALGEKLDDSEVAEVTKDCMDP 449
           AE    ++      DD    +VT++C+DP
Sbjct: 64  AESFKCVIVKNSTKDDVNKVQVTRECLDP 92


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 488 VVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIF 595
           V+K L+ CK +V +L  +H      + Q +  ++IF
Sbjct: 130 VLKALSYCKPKVTQLQGRHVRTDEEMEQCEIAEDIF 165


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 215 DIPYNILDTDKPLFYTNNII 156
           DI +NI    K LFYT N+I
Sbjct: 228 DIIFNITLRRKTLFYTVNLI 247


>AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP21 protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = -1

Query: 541 LGAELTH---TLLALGEKLDDSEVAEVTKDCM 455
           LG EL     T + LG+   DSE A+ T  CM
Sbjct: 35  LGGELPEDFATKMRLGDLTLDSETAKCTIQCM 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,862
Number of Sequences: 2352
Number of extensions: 12463
Number of successful extensions: 38
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)