Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_M18
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 312 1e-85
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 312 1e-85
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 312 1e-85
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 308 4e-84
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z66511-6|CAA91318.1| 343|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical pr... 28 9.0
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 312 bits (767), Expect = 1e-85
Identities = 148/248 (59%), Positives = 181/248 (72%), Gaps = 4/248 (1%)
Frame = -2
Query: 804 RFRCKGQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAK 625
RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA LNT K
Sbjct: 132 RFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCK 191
Query: 624 VEPGSNCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDK 445
VE GS A++ A +I+G+D+ KFE AK FG E +NPK +
Sbjct: 192 VEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVEL 251
Query: 444 P----IQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTR 277
P Q LV+ DGG +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TR
Sbjct: 252 PEGKSFQAWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATR 311
Query: 276 PFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHA 97
PFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +IN AF ++H
Sbjct: 312 PFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHK 371
Query: 96 GKSIRAVV 73
G+S+R+V+
Sbjct: 372 GESLRSVL 379
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 312 bits (767), Expect = 1e-85
Identities = 148/248 (59%), Positives = 181/248 (72%), Gaps = 4/248 (1%)
Frame = -2
Query: 804 RFRCKGQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAK 625
RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA LNT K
Sbjct: 132 RFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCK 191
Query: 624 VEPGSNCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDK 445
VE GS A++ A +I+G+D+ KFE AK FG E +NPK +
Sbjct: 192 VEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVEL 251
Query: 444 P----IQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTR 277
P Q LV+ DGG +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TR
Sbjct: 252 PEGKSFQAWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATR 311
Query: 276 PFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHA 97
PFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +IN AF ++H
Sbjct: 312 PFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHK 371
Query: 96 GKSIRAVV 73
G+S+R+V+
Sbjct: 372 GESLRSVL 379
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 312 bits (767), Expect = 1e-85
Identities = 148/248 (59%), Positives = 181/248 (72%), Gaps = 4/248 (1%)
Frame = -2
Query: 804 RFRCKGQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAK 625
RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA LNT K
Sbjct: 134 RFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCK 193
Query: 624 VEPGSNCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDK 445
VE GS A++ A +I+G+D+ KFE AK FG E +NPK +
Sbjct: 194 VEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVEL 253
Query: 444 P----IQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTR 277
P Q LV+ DGG +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TR
Sbjct: 254 PEGKSFQAWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATR 313
Query: 276 PFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHA 97
PFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +IN AF ++H
Sbjct: 314 PFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHK 373
Query: 96 GKSIRAVV 73
G+S+R+V+
Sbjct: 374 GESLRSVL 381
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 308 bits (755), Expect = 4e-84
Identities = 145/246 (58%), Positives = 177/246 (71%), Gaps = 4/246 (1%)
Frame = -2
Query: 804 RFRCKGQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAK 625
RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA LNT K
Sbjct: 305 RFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPQAPLEKVSLLGCGISTGYGAVLNTCK 364
Query: 624 VEPGSNCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDK 445
VE GS A++ A +I+G+D+ KFE AK FG E +NPK +
Sbjct: 365 VEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFEKAKMFGATECINPKSVEL 424
Query: 444 P----IQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTR 277
P Q LV+ DGG +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TR
Sbjct: 425 PEGKSFQSWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATR 484
Query: 276 PFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHA 97
PFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +IN AF ++
Sbjct: 485 PFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRCNIDDINAAFDVLRK 544
Query: 96 GKSIRA 79
G+ +R+
Sbjct: 545 GEGLRS 550
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 39.1 bits (87), Expect = 0.004
Identities = 57/232 (24%), Positives = 89/232 (38%), Gaps = 3/232 (1%)
Frame = -2
Query: 756 TFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXX 577
TF +Y + +I KV+ L + CG T Y +L V+PG +
Sbjct: 128 TFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAY-KSLKATNVKPGQIVVLTGAGGGL 186
Query: 576 XXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP-IQQVLVDLTDGGLE 400
R++ VD + K + + G FV+ +D P I + LT+GG
Sbjct: 187 GSFGIQYAKAMGMRVVAVD-HISKEDHCRNLGAEWFVDA--FDTPDIVAHIRKLTNGGAH 243
Query: 399 YTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGR-TWKGTAFGGY 223
M ALE K G V +G+ G I L+ T KG+ G
Sbjct: 244 GVVSFAAAKKPMEYALEYVRKR-GTVVFVGLPKDG-TIPLDTLSLICNEITVKGSIVG-- 299
Query: 222 KSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGK-SIRAVVD 70
SR V + +D ++ + + V L+++ + M GK + R VVD
Sbjct: 300 -SRMDVDEAID-FITRGIV--HVPIELVKLEDVPSVYQRMKDGKVTSRVVVD 347
>Z66511-6|CAA91318.1| 343|Caenorhabditis elegans Hypothetical
protein F07A11.5 protein.
Length = 343
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 516 NPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTD 412
N FE+A+ GV F+NP D + + +++L D
Sbjct: 179 NRRAFEIARSHGVTTFLNPAPGDPNMDKTILELVD 213
>Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical
protein R53.2 protein.
Length = 218
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 210 SVPKLVDEYLEKKLPLDEFVTH 145
S+ KL+D+YL K++ +DE H
Sbjct: 59 SIGKLIDQYLRKEIDMDEHALH 80
>Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical
protein F32A11.6 protein.
Length = 367
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +2
Query: 227 PPKAVPFQVRPVTSWNGRVLISSPAAATPMITDTPHPLWQASSAALMVP 373
P + Q P+ S + + SP A T PHP W S++ +P
Sbjct: 246 PMGGLEMQSSPMKSSSDSSHMRSPMAQMNCETTRPHPSWPLESSSFFLP 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,819,056
Number of Sequences: 27780
Number of extensions: 367178
Number of successful extensions: 946
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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