Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_M15
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81037-5|CAB02752.1| 320|Caenorhabditis elegans Hypothetical pr... 106 1e-23
Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical pr... 95 6e-20
Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U80029-6|AAB37586.1| 199|Caenorhabditis elegans Hypothetical pr... 30 1.4
U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine rece... 29 2.4
Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical p... 29 3.2
AL132895-4|CAC14401.1| 333|Caenorhabditis elegans Hypothetical ... 29 3.2
AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical ... 28 7.3
AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical ... 28 7.3
AF025464-2|AAN84804.1| 496|Caenorhabditis elegans Prion-like-(q... 28 7.3
AF025464-1|AAN84805.1| 529|Caenorhabditis elegans Prion-like-(q... 28 7.3
U40028-3|AAW57826.1| 378|Caenorhabditis elegans Fucosyl transfe... 27 9.7
AJ745073-1|CAG32979.1| 378|Caenorhabditis elegans alpha1,3-fuco... 27 9.7
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 9.7
>Z81037-5|CAB02752.1| 320|Caenorhabditis elegans Hypothetical
protein C17E4.9 protein.
Length = 320
Score = 106 bits (255), Expect = 1e-23
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Frame = -1
Query: 697 KLSTFLAAYKRDGXKA---GAGQNIHNCDFKLPPPAGKVCDVDISAWGP-CVQDNYFGYH 530
++ T+L Y + + GAG + N D + P A C D+S + C + + FGY
Sbjct: 129 QMKTYLTKYDSNATETRECGAGDS--NDDLEKNPDA-LPCRFDLSVFDKGCSEKSDFGYK 185
Query: 529 KSTPCIFLKLNKIYGWRPKFYNSSDNLPKDMPEDLKEHIRNMTAYDKNYLNMVWVSCQGE 350
PC+ + LN++ GWRP Y + +PE++K D+ + ++C+G
Sbjct: 186 SGKPCVIISLNRLIGWRPTDYQENS-----VPEEVK---------DRYKAGSIAINCRGA 231
Query: 349 NPADRENIGPIQYLPHRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINIECRAWANN 170
D+E+IG + Y+P G G Y+PY +GY P+ V L+ +ECRA+A N
Sbjct: 232 TNVDQEHIGKVTYMPSNGIDGRYYPYVFTKGYQQPIAMVKFDTIPRNKLVIVECRAYALN 291
Query: 169 IKYERLEAMGSVHIEMLIE 113
I+++ +G V+ E+++E
Sbjct: 292 IEHDISSRLGMVYFEVMVE 310
>Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical
protein F55F3.3 protein.
Length = 317
Score = 94.7 bits (225), Expect = 6e-20
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Frame = -1
Query: 697 KLSTFLAAYKRDGXKAGAGQNIHNCDFKLPPPAGKVCDVDISAW--GPCVQDNYFGYHKS 524
+L +L+ YK G + +N + C D+ + C + +GY
Sbjct: 126 QLDNYLSKYKNTNETRDCGASDNNDALETDTDTFP-CRFDLGLFEKANCGAKDQYGYKSG 184
Query: 523 TPCIFLKLNKIYGWRPKFYNSSDNLPKDMPEDLKEHIRNMTAYDKNYLNMVWVSCQGENP 344
PC+ + LN++ GWRP Y+ +PE++K + + ++C+G
Sbjct: 185 KPCVAVSLNRLIGWRPVNYDDGS-----VPEEIKGRYKP---------GSITINCEGATS 230
Query: 343 ADRENIGPIQYLPHRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINIECRAWANNIK 164
D+E++G ++Y+P G G Y+PY Y P+ V L+ +ECRA+A+NI+
Sbjct: 231 FDKEHLGKVKYIPETGIDGRYYPYVFVPSYQQPIAMVKFDTIPRNKLVIVECRAYASNIE 290
Query: 163 YERLEAMGSVHIEMLIE 113
++ +G V+ E+ +E
Sbjct: 291 HDISTRLGMVYFELFVE 307
>Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical
protein C43F9.6 protein.
Length = 374
Score = 52.4 bits (120), Expect = 3e-07
Identities = 42/118 (35%), Positives = 47/118 (39%)
Frame = -1
Query: 541 FGYHKSTPCIFLKLNKIYGWRPKFYNSSDNLPKDMPEDLKEHIRNMTAYDKNYLNMVWVS 362
FGY K PCI LKLNKI GW P + S N K DL + +
Sbjct: 242 FGYSKGQPCIMLKLNKIVGWVPNL-SPSKNKTKCPSGDL--------CCGQG----IKFK 288
Query: 361 CQGENPADRENIGPIQYLPHRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINIEC 188
C AD + +Y P G P YFPY NQ GY P V L IEC
Sbjct: 289 CTSN--ADVK----FEYFPKTGIPTCYFPYANQGGYEQPYQMVKLTNITVNRETTIEC 340
>U80029-6|AAB37586.1| 199|Caenorhabditis elegans Hypothetical
protein T20D4.11 protein.
Length = 199
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 484 WRPKFYNSSDNLPKDMPEDLKEHIRNMTAYDKNYLNMVWVSCQG 353
W+P FY+ ++ P PE+++E +NM D ++V +C G
Sbjct: 135 WKP-FYDLNEVGPDTTPEEMEELCKNMLGKDNCMKDLVGRTCGG 177
>U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine
receptor, class w protein115 protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 549 SCTQGPHALMSTSQTFPAGGGSLKSQLWMF 638
SC +GPH + + S F A G L ++F
Sbjct: 193 SCAKGPHHIFAVSDLFTANDGFLAKYFYLF 222
>Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical
protein ZK1098.3 protein.
Length = 784
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -1
Query: 517 CIFLKLNKIYGWRPKFYNSSDNLPKDMPEDLKEHIRNMTAYDKNYL 380
CI+ + + W Y++ D K MP DLKE + N T KN L
Sbjct: 349 CIYERRIEALFWAT--YSNIDRNSKYMPPDLKEELENPTTEMKNGL 392
>AL132895-4|CAC14401.1| 333|Caenorhabditis elegans Hypothetical
protein Y59A8A.4 protein.
Length = 333
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 304 HRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINIECRA 182
H+GF + ++ G LS L+ ++LQ P ++ I C++
Sbjct: 270 HQGFNNVVYICSSLHGVLSTLIMIYLQNPYRAVVKRIFCQS 310
>AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical
protein Y87G2A.8b protein.
Length = 586
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 GTVWDQCSRDQLGSRLGRK 366
G +WD CS DQ G LG++
Sbjct: 535 GIIWDICSYDQWGVELGKQ 553
>AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical
protein Y87G2A.8a protein.
Length = 551
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 GTVWDQCSRDQLGSRLGRK 366
G +WD CS DQ G LG++
Sbjct: 500 GIIWDICSYDQWGVELGKQ 518
>AF025464-2|AAN84804.1| 496|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform a protein.
Length = 496
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 307 PHRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINIECRAWANNIKYERLEAMGSV 134
PH+ + +PY Q+ SP P M N+ C A+ ++I +++ E MGS+
Sbjct: 294 PHQQWTPQGYPYGYQQNPNSP------PNPALMMDANLPCSAFTDDICHQQREQMGSL 345
>AF025464-1|AAN84805.1| 529|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform b protein.
Length = 529
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 307 PHRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINIECRAWANNIKYERLEAMGSV 134
PH+ + +PY Q+ SP P M N+ C A+ ++I +++ E MGS+
Sbjct: 316 PHQQWTPQGYPYGYQQNPNSP------PNPALMMDANLPCSAFTDDICHQQREQMGSL 367
>U40028-3|AAW57826.1| 378|Caenorhabditis elegans Fucosyl
transferase protein 5 protein.
Length = 378
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Frame = -1
Query: 673 YKRDGXKAGAGQNIHNCDFKLPPPAGKVCDVDISAWGPCVQDNYF---GYHKSTPCIFL- 506
YK++ + + CD K P + S V + ++ G +K+ P +
Sbjct: 217 YKKEPAECPRRRGPPGCDVKFHSPYKFAIAFENSNCKDYVTEKFWKKAGIYKTVPIVMSR 276
Query: 505 KLNKIYGWRPKFYNSSDNLPKDMPEDLKEHIRNMTAYDKNYL 380
K+ + G Y + D+ P E+ HI+N+T+ ++ Y+
Sbjct: 277 KIYRDLGIPDSMYIAVDDYPN--LEEFVHHIQNVTSNEEEYM 316
>AJ745073-1|CAG32979.1| 378|Caenorhabditis elegans
alpha1,3-fucosyltransferase homologueprotein.
Length = 378
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Frame = -1
Query: 673 YKRDGXKAGAGQNIHNCDFKLPPPAGKVCDVDISAWGPCVQDNYF---GYHKSTPCIFL- 506
YK++ + + CD K P + S V + ++ G +K+ P +
Sbjct: 217 YKKEPAECPRRRGPPGCDVKFHSPYKFAIAFENSNCKDYVTEKFWKKAGIYKTVPIVMSR 276
Query: 505 KLNKIYGWRPKFYNSSDNLPKDMPEDLKEHIRNMTAYDKNYL 380
K+ + G Y + D+ P E+ HI+N+T+ ++ Y+
Sbjct: 277 KIYRDLGIPDSMYIAVDDYPN--LEEFVHHIQNVTSNEEEYM 316
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 235 QLQEGSGILPGWCRGSSTPGSLGEVGTVWDQCSRDQLGSRLGRKP 369
+L E +G+ GWC E+ + DQC DQL + + KP
Sbjct: 2178 ELCETTGMPSGWCMQHDK-----ELMEICDQCGLDQLAANVLNKP 2217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,765,226
Number of Sequences: 27780
Number of extensions: 355604
Number of successful extensions: 971
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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