Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_M11
         (478 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for ...   255   5e-68
BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.       255   5e-68
BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11 p...   255   5e-68
BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11 p...   255   5e-68
BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11 p...   255   5e-68
BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.       255   5e-68
BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11 p...   255   5e-68
BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11 p...   255   5e-68
AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11 p...   255   5e-68
AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11 p...   154   1e-37
BC098386-1|AAH98386.1|  336|Homo sapiens vacuolar protein sortin...    29   6.3  
BC014128-1|AAH14128.1|  336|Homo sapiens vacuolar protein sortin...    29   6.3  
BC009747-1|AAH09747.1|  336|Homo sapiens vacuolar protein sortin...    29   6.3  

>X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for
           ribosomal protein S11. ).
          Length = 158

 Score =  255 bits (625), Expect = 5e-68
 Identities = 121/158 (76%), Positives = 139/158 (87%), Gaps = 6/158 (3%)
 Frame = -2

Query: 456 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 295
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 294 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 115
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 114 EIGDIVTIGECRPLSKTVRFNVLKVSKGQGLEESFKKF 1
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G ++ F+KF
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158


>BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  255 bits (625), Expect = 5e-68
 Identities = 121/158 (76%), Positives = 139/158 (87%), Gaps = 6/158 (3%)
 Frame = -2

Query: 456 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 295
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 294 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 115
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 114 EIGDIVTIGECRPLSKTVRFNVLKVSKGQGLEESFKKF 1
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G ++ F+KF
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158


>BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  255 bits (625), Expect = 5e-68
 Identities = 121/158 (76%), Positives = 139/158 (87%), Gaps = 6/158 (3%)
 Frame = -2

Query: 456 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 295
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 294 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 115
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 114 EIGDIVTIGECRPLSKTVRFNVLKVSKGQGLEESFKKF 1
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G ++ F+KF
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158


>BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  255 bits (625), Expect = 5e-68
 Identities = 121/158 (76%), Positives = 139/158 (87%), Gaps = 6/158 (3%)
 Frame = -2

Query: 456 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 295
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 294 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 115
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 114 EIGDIVTIGECRPLSKTVRFNVLKVSKGQGLEESFKKF 1
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G ++ F+KF
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158


>BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  255 bits (625), Expect = 5e-68
 Identities = 121/158 (76%), Positives = 139/158 (87%), Gaps = 6/158 (3%)
 Frame = -2

Query: 456 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 295
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 294 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 115
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 114 EIGDIVTIGECRPLSKTVRFNVLKVSKGQGLEESFKKF 1
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G ++ F+KF
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158


>BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  255 bits (625), Expect = 5e-68
 Identities = 121/158 (76%), Positives = 139/158 (87%), Gaps = 6/158 (3%)
 Frame = -2

Query: 456 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 295
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 294 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 115
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 114 EIGDIVTIGECRPLSKTVRFNVLKVSKGQGLEESFKKF 1
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G ++ F+KF
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158


>BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  255 bits (625), Expect = 5e-68
 Identities = 121/158 (76%), Positives = 139/158 (87%), Gaps = 6/158 (3%)
 Frame = -2

Query: 456 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 295
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 294 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 115
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 114 EIGDIVTIGECRPLSKTVRFNVLKVSKGQGLEESFKKF 1
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G ++ F+KF
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158


>BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  255 bits (625), Expect = 5e-68
 Identities = 121/158 (76%), Positives = 139/158 (87%), Gaps = 6/158 (3%)
 Frame = -2

Query: 456 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 295
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 294 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 115
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 114 EIGDIVTIGECRPLSKTVRFNVLKVSKGQGLEESFKKF 1
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G ++ F+KF
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158


>AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  255 bits (625), Expect = 5e-68
 Identities = 121/158 (76%), Positives = 139/158 (87%), Gaps = 6/158 (3%)
 Frame = -2

Query: 456 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 295
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 294 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 115
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 114 EIGDIVTIGECRPLSKTVRFNVLKVSKGQGLEESFKKF 1
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G ++ F+KF
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158


>AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11
           protein.
          Length = 83

 Score =  154 bits (374), Expect = 1e-37
 Identities = 69/83 (83%), Positives = 77/83 (92%)
 Frame = -2

Query: 249 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLS 70
           VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLS
Sbjct: 1   VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 60

Query: 69  KTVRFNVLKVSKGQGLEESFKKF 1
           KTVRFNVLKV+K  G ++ F+KF
Sbjct: 61  KTVRFNVLKVTKAAGTKKQFQKF 83


>BC098386-1|AAH98386.1|  336|Homo sapiens vacuolar protein sorting
           26 homolog B (S. pombe) protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 474 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 367
           + L+  + D+ E+ + KQ  V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305


>BC014128-1|AAH14128.1|  336|Homo sapiens vacuolar protein sorting
           26 homolog B (S. pombe) protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 474 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 367
           + L+  + D+ E+ + KQ  V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305


>BC009747-1|AAH09747.1|  336|Homo sapiens vacuolar protein sorting
           26 homolog B (S. pombe) protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 474 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 367
           + L+  + D+ E+ + KQ  V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,765,293
Number of Sequences: 237096
Number of extensions: 1368048
Number of successful extensions: 2626
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2617
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)