Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_M05
         (794 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060632-1|AAL28180.1| 1335|Drosophila melanogaster GH04942p pro...    29   7.3  
AJ270939-1|CAC20094.1| 1335|Drosophila melanogaster Nahoda prote...    29   7.3  
AE013599-3502|AAN16114.1| 1335|Drosophila melanogaster CG12781-P...    29   7.3  
AE013599-3501|AAF46927.2| 1335|Drosophila melanogaster CG12781-P...    29   7.3  

>AY060632-1|AAL28180.1| 1335|Drosophila melanogaster GH04942p
           protein.
          Length = 1335

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +2

Query: 107 PTTKRHRFNGMPC-KLKINI*KSYTLSISDFVQSGRETP 220
           P T RH FNGM C  + I   +     + D+    R TP
Sbjct: 588 PYTPRHDFNGMDCTDIVIGAARGMASRVGDYYSRDRSTP 626


>AJ270939-1|CAC20094.1| 1335|Drosophila melanogaster Nahoda protein
           protein.
          Length = 1335

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +2

Query: 107 PTTKRHRFNGMPC-KLKINI*KSYTLSISDFVQSGRETP 220
           P T RH FNGM C  + I   +     + D+    R TP
Sbjct: 588 PYTPRHDFNGMDCTDIVIGAARGMASRVGDYYSRDRSTP 626


>AE013599-3502|AAN16114.1| 1335|Drosophila melanogaster CG12781-PB,
           isoform B protein.
          Length = 1335

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +2

Query: 107 PTTKRHRFNGMPC-KLKINI*KSYTLSISDFVQSGRETP 220
           P T RH FNGM C  + I   +     + D+    R TP
Sbjct: 588 PYTPRHDFNGMDCTDIVIGAARGMASRVGDYYSRDRSTP 626


>AE013599-3501|AAF46927.2| 1335|Drosophila melanogaster CG12781-PA,
           isoform A protein.
          Length = 1335

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +2

Query: 107 PTTKRHRFNGMPC-KLKINI*KSYTLSISDFVQSGRETP 220
           P T RH FNGM C  + I   +     + D+    R TP
Sbjct: 588 PYTPRHDFNGMDCTDIVIGAARGMASRVGDYYSRDRSTP 626


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,893,419
Number of Sequences: 53049
Number of extensions: 548541
Number of successful extensions: 1394
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)