Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_M03
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 41 2e-04
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.14
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 29 0.58
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 0.76
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 1.0
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 3.1
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 27 3.1
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 3.1
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 4.1
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 4.1
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 5.4
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 5.4
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 26 5.4
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.1
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 25 7.1
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 25 7.1
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 25 9.4
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 40.7 bits (91), Expect = 2e-04
Identities = 21/94 (22%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = -3
Query: 642 LEXRAQQDEERMDQLTNQLKEARLLAEDAD---GXSDEVSRKLAFVEDELEVAEDRVKSG 472
L +++ E ++++L + K+ RL A++ D ++++SRK+ +E+ELE + ++
Sbjct: 46 LSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRET 105
Query: 471 DAKISELEEELKVVGNSLKSXEVSEEXANQRVEE 370
K+ + + + + ++S E + Q++EE
Sbjct: 106 TEKMRQTDVKAEHFERRVQSLERERDDMEQKLEE 139
Score = 29.5 bits (63), Expect = 0.44
Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 2/151 (1%)
Frame = -3
Query: 633 RAQQDEE--RMDQLTNQLKEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKI 460
RA+ DE R + +LKE L + + +SRK E +LE E+ K ++
Sbjct: 12 RAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETK--QLRL 69
Query: 459 SELEEELKVVGNSLKSXEVSEEXANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKKLQ 280
E+++ S +V E + +E + E+ V+ L+
Sbjct: 70 KADNEDIQKTEAEQLSRKV--ELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLE 127
Query: 279 KEVDRLEDEXGINKDRYKSLADEMDSTFAEL 187
+E D +E + D+Y + E+D L
Sbjct: 128 RERDDMEQKLEEMTDKYTKVKAELDEVHQAL 158
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.1 bits (67), Expect = 0.14
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = -3
Query: 618 EERMDQLTNQLKEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEEL 439
EER D L N+L + + D+D + L V DEL+ + S + SE+ ++
Sbjct: 1172 EERSD-LANRLSDMKKSLSDSDNVISVIRSDLVRVNDELDTLKKDKDSLSTQYSEVCQDR 1230
Query: 438 KVVGNSLKSXEVS 400
+ +SLK E S
Sbjct: 1231 DDLLDSLKGCEES 1243
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 29.1 bits (62), Expect = 0.58
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = -3
Query: 633 RAQQDEERMDQLTNQLKEARLLAEDADGX----SDEVSRKLAFVEDELEVAEDRVKSGDA 466
R+Q+D++ + +E RLL E A S EVS L+ E+ ED + S D
Sbjct: 552 RSQRDKQESTE-----RELRLLQEKAASLERNKSSEVSNLLSRYNTEVAHLEDALHSKDR 606
Query: 465 KISELEEELKVVGNSLKS--XEVSEEXANQR 379
+++ L ELK N + E EE Q+
Sbjct: 607 ELANLGVELKSTENRYRQLLQEKEEELEIQK 637
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.7 bits (61), Expect = 0.76
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -3
Query: 597 TNQLKEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSL 418
+N L E L E+ +G + ++ + + E R+KS + +SEL + N L
Sbjct: 516 SNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKL 575
Query: 417 KSXE 406
K E
Sbjct: 576 KDKE 579
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = -3
Query: 618 EERMDQLTNQLKEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEEL 439
+E +++LT+++ + D DE+ ++L +E+E A++ +K S L E+L
Sbjct: 598 KEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNKAKE---DSTSKTSNLLEQL 654
Query: 438 KVVGNSLKSXEVSEEXANQ 382
K+ + S E Q
Sbjct: 655 KMTEAEVDSLRKENEENKQ 673
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 26.6 bits (56), Expect = 3.1
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = -3
Query: 618 EERMDQLTNQLKEARLLA----EDADGXSDEVSRKLAF---VEDELEVAED-RVKSGDAK 463
+E D +TNQ + A A ++ E R A V +E++V D RV++ AK
Sbjct: 644 KEDADFITNQYQNASTFAAEQSKEVAKLQAECKRLQAINSKVMEEVKVYNDSRVEALLAK 703
Query: 462 ISELEEELKVV 430
+S LEE LK++
Sbjct: 704 VSSLEETLKIL 714
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -3
Query: 537 VSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLK 415
+ R+L VEDEL A + ++ ELE+++ + ++L+
Sbjct: 519 LQRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQ 559
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -1
Query: 620 TRSVWTSSPTN*KRPVSSPRTLTXNPTRFRENWPSLKTNSKSPKTVSSLVTLRSQS 453
T VW+++ PVS+P T + + F ++P+ + S S SS S S
Sbjct: 122 TAPVWSNTSV----PVSTPETSATSSSEFFTSYPATSSESSSSYPASSTEVASSYS 173
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = -3
Query: 603 QLTNQLKEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGN 424
+L + +EA ++ + D K +E+ E + ++K+ + + LEE K +
Sbjct: 166 ELAKKFEEASQISNKLEKEKDATGSKS--IEELWEEHQKQLKNAGLEPASLEEYQKQWED 223
Query: 423 SLKSXEVSEEXANQRVEEF 367
LKS +S++ V F
Sbjct: 224 FLKSNNISDDPYTSSVNSF 242
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/83 (19%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -3
Query: 642 LEXRAQQDEERMDQLTNQLKEARLLAEDADGXSD--EVSRKLAFVEDELEVAEDRVKSGD 469
L+ ++ E+ + N+L+ + A DADG ++ + +++ + + E +V++
Sbjct: 1489 LKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQVQNLS 1548
Query: 468 AKISELEEELKVVGNSLKSXEVS 400
A+++ L E G+ + E++
Sbjct: 1549 AELAALREHSPTQGSLENADEIA 1571
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/76 (21%), Positives = 32/76 (42%)
Frame = -3
Query: 633 RAQQDEERMDQLTNQLKEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISE 454
R + ER+ L NQ+ A E + LA + E+ D + + K+S
Sbjct: 896 RVEVVHERLSSLENQVTIADEKYEFLYAEKQSIEEDLANKQTEISYLSDLSSTLEKKLSS 955
Query: 453 LEEELKVVGNSLKSXE 406
++++ + + + K E
Sbjct: 956 IKKDEQTISSKYKELE 971
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 5.4
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -3
Query: 642 LEXRAQQDEERMDQLTNQLKEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAK 463
+E R + E LT L+E+ E D +++ + ++DE + + +
Sbjct: 463 MEERVSEVERTF--LTKLLEESAQGIEYTDQKLEKMGGWMKKLQDENSEKTETIAQLEQI 520
Query: 462 ISELEEELK-VVGNSLKSXEVSEEXANQ 382
I EL EEL+ + S+K +++ NQ
Sbjct: 521 IEELHEELRSLEEESIKESSATQQNENQ 548
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 635 TGHSRTRSVWTSSPTN*KRPVSSPRTLTXNP-TRFRENWPSLKTNSKSPKTVSS 477
+G RT+S+ SP ++P T + P T +E+W + S ++ ++
Sbjct: 406 SGSERTKSLSKESPVEPEKPALPDATSSSTPTTENKESWTNQGIKSSQQRSANA 459
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 545 PTRFRENWPSLKTNSKSPKTVSSLVTLRSQSLKKN*RSSVTPLNLSK 405
PTR ++KT K +T SL+ +S++LKK R V + +K
Sbjct: 11 PTRM--TLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAK 55
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 596 PTN*KRPVSSPRTLTXNPTRFRENWPSLKTNSKSPK 489
P+N K PV R+ + R ++NW + S K
Sbjct: 229 PSNVKSPVQQHRSFVSSSARAKKNWGRQSNSPNSNK 264
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 25.4 bits (53), Expect = 7.1
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -3
Query: 618 EERMDQLTNQLKEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISELE 448
+ER+D LTN L E LL E D + + + ED E R S D + LE
Sbjct: 224 QERLDILTNLLDELTLLYE-TDKFDETMKEAILSFEDLKEQEIRRKVSSDDVHNYLE 279
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 492 EDRVKSGDAKISELEEELKVVGNSLKSXEV 403
E+R+K+ DA I EE+ K + ++++S E+
Sbjct: 47 EERIKACDAGIQTSEEQKKELEHTMQSLEM 76
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.0 bits (52), Expect = 9.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 513 EDELEVAEDRVKSGDAKISELEEELKVVGNSLKSXEVSEEXANQRV 376
E E E A K D+K S++EEE + ++ E+ EE N+ +
Sbjct: 15 ETESESANGDTKQDDSKKSQVEEE----EDGIEESELGEEKDNKTI 56
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,716,874
Number of Sequences: 5004
Number of extensions: 23764
Number of successful extensions: 155
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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