Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_M03
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    36   8e-04
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    31   0.031
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.6  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           25   2.7  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   6.3  
Y17688-1|CAA76813.1|  153|Anopheles gambiae gSG1 protein protein.      23   8.3  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         23   8.3  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         23   8.3  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         23   8.3  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.3  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   8.3  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 36.3 bits (80), Expect = 8e-04
 Identities = 18/88 (20%), Positives = 49/88 (55%)
 Frame = -3

Query: 645  VLEXRAQQDEERMDQLTNQLKEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDA 466
            VL+ +     +++D+L+  + +  +  + ++    +   K+  +EDE+E A+  ++ G+ 
Sbjct: 897  VLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGND 956

Query: 465  KISELEEELKVVGNSLKSXEVSEEXANQ 382
            + ++LEEE   +   L+  +++ E A++
Sbjct: 957  ERTQLEEEANKLREELEEMKLAIEKAHE 984



 Score = 25.0 bits (52), Expect = 2.1
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = -3

Query: 543 DEVS--RKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSXEVS-EEXANQRVE 373
           DEV+  RKL  +    E  E  ++   A++  LEE L V    L++ +   +E AN+  E
Sbjct: 500 DEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERE 559


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 31.1 bits (67), Expect = 0.031
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = -3

Query: 591 QLKEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKS 412
           +LKE R   E+ DG       K   +  E++ A+DR+K+    + + ++++ V     KS
Sbjct: 231 ELKETRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDV-VTAKDEKS 289

Query: 411 XEVSE 397
              +E
Sbjct: 290 VLATE 294


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 1/135 (0%)
 Frame = -3

Query: 588 LKEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSX 409
           ++E   L + AD  S +    L  V  E +  +DR+ S   K +++EE  K + +     
Sbjct: 382 VQEYDRLKQKADATSSKYLIHLDSVNREQKSDQDRLDSEINKKAQIEENYKKIESEKNEA 441

Query: 408 EVSEEXANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKKLQKEVDRLEDEXGINK-DR 232
              +E     ++                       ++ + +LQ E+D + ++ G  K D+
Sbjct: 442 LKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSELDNVREQLGDAKIDK 501

Query: 231 YKSLADEMDSTFAEL 187
           ++    +      EL
Sbjct: 502 HEDARRKKKQEVVEL 516


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 368 NSSTRWLAXSSDTSXDLRELPTTFNSSSSSEILASPD 478
           NSST +L     +S       ++  SSSSS   +SPD
Sbjct: 97  NSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPD 133


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 581 RPVSSPRTLTXNPTRFRENWPSLKTNSKSP 492
           RP++   TL  NPT FR  + S    S  P
Sbjct: 416 RPLTPGGTLPHNPTYFRTVYSSSDDGSIGP 445


>Y17688-1|CAA76813.1|  153|Anopheles gambiae gSG1 protein protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 300 KTVKKLQKEVDRLEDEXGINKDRYKSLADEMDSTFAEL 187
           K ++  Q E DR   E    +++   L DE+ ST+  L
Sbjct: 105 KKIQVNQWEADRYVQESDTIRNQLTRLRDELRSTYRSL 142


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 14/72 (19%), Positives = 33/72 (45%)
 Frame = -3

Query: 585 KEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSXE 406
           KEA     +AD  +++++ K+      LE     ++  +  +     + +   ++LK  +
Sbjct: 159 KEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDRASLQKEDAVDALKQLK 218

Query: 405 VSEEXANQRVEE 370
            ++E A + V E
Sbjct: 219 YAKEQAEKAVAE 230


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 14/72 (19%), Positives = 33/72 (45%)
 Frame = -3

Query: 585 KEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSXE 406
           KEA     +AD  +++++ K+      LE     ++  +  +     + +   ++LK  +
Sbjct: 159 KEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDRASLQKEDAVDALKQLK 218

Query: 405 VSEEXANQRVEE 370
            ++E A + V E
Sbjct: 219 YAKEQAEKAVAE 230


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 14/72 (19%), Positives = 33/72 (45%)
 Frame = -3

Query: 585 KEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSXE 406
           KEA     +AD  +++++ K+      LE     ++  +  +     + +   ++LK  +
Sbjct: 159 KEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDRASLQKEDAVDALKQLK 218

Query: 405 VSEEXANQRVEE 370
            ++E A + V E
Sbjct: 219 YAKEQAEKAVAE 230


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 14/72 (19%), Positives = 33/72 (45%)
 Frame = -3

Query: 585  KEARLLAEDADGXSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSXE 406
            KEA     +AD  +++++ K+      LE     ++  +  +     + +   ++LK  +
Sbjct: 1298 KEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDRASLQKEDAVDALKQLK 1357

Query: 405  VSEEXANQRVEE 370
             ++E A + V E
Sbjct: 1358 YAKEQAEKAVAE 1369


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 300 KTVKKLQKEVDRLEDEXGINKDRYKSLADEMDSTFAEL 187
           K ++  Q E DR   E    +++   L DE+ ST+  L
Sbjct: 105 KKIQVNQWEADRYVQESDTIRNQLTRLRDELRSTYRSL 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,477
Number of Sequences: 2352
Number of extensions: 5246
Number of successful extensions: 26
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)