Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_M01
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026213-8|AAB71303.1|  226|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U80024-6|AAW88410.1|  300|Caenorhabditis elegans Serpentine rece...    28   7.8  
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    28   7.8  
AF125442-2|AAD12792.1|  360|Caenorhabditis elegans Serpentine re...    28   7.8  

>AF026213-8|AAB71303.1|  226|Caenorhabditis elegans Hypothetical
           protein F08F1.3 protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/48 (43%), Positives = 27/48 (56%)
 Frame = -2

Query: 701 SNYKLETSSFSLQFLIIIRIAKFNQITTDLVSSFQSPILESNILFFYL 558
           S+ KL+T   SL FLI+I IAKF         SF+  +  SNI F +L
Sbjct: 128 SSEKLKTVHNSLIFLIVIFIAKFVNF------SFKHVVFSSNIKFLHL 169


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
            T08A11.1 protein.
          Length = 1872

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 396  VDDVYIRN*NYLHGYGTVAVSCQRCQNSSNTKFFIWLCN 280
            +DDV I   NY+H  G + +S    +N +   FF W  N
Sbjct: 1777 LDDVTISM-NYIHQAGGMFISLVLSENPNRPPFFYWAWN 1814


>U80024-6|AAW88410.1|  300|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 8 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/55 (20%), Positives = 30/55 (54%)
 Frame = -2

Query: 488 VLLYFSLMYIVMSYVIYICTYIAYNI*F*R*LMTSTLETEIIYMVMARWPYHVKG 324
           ++L+F  +++ ++Y ++ C Y+ ++I +     T  L  + +++V   +P    G
Sbjct: 46  MILFFYRLFLDVTYNVFACAYMTFSILY--SFFTEELREQQVFIVYVGFPLQTVG 98


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
            protein T08A11.1 protein.
          Length = 1872

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 396  VDDVYIRN*NYLHGYGTVAVSCQRCQNSSNTKFFIWLCN 280
            +DDV I   NY+H  G + +S    +N +   FF W  N
Sbjct: 1777 LDDVTISM-NYIHQAGGMFISLVLSENPNRPPFFYWAWN 1814


>AF125442-2|AAD12792.1|  360|Caenorhabditis elegans Serpentine
           receptor, class v protein19 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -2

Query: 368 IIYMVMARWPYHVKGVRIAQTQSFSYGSVTEALIALFIILNCYG 237
           +I+    R+ Y V    + + Q F + +V    +  FII+ CYG
Sbjct: 73  LIFYTSKRFAYAVIPYFVYKHQDFGFAAVAYDGVFWFIIIRCYG 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,167,579
Number of Sequences: 27780
Number of extensions: 306291
Number of successful extensions: 649
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)