Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_L23
         (637 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-753|AAG22299.1|   79|Drosophila melanogaster CG33199-PA...    37   0.026
AY118805-1|AAM50665.1|  159|Drosophila melanogaster GH20534p pro...    29   4.0  
AE014134-3253|AAF53902.1|  159|Drosophila melanogaster CG17472-P...    29   4.0  

>AE013599-753|AAG22299.1|   79|Drosophila melanogaster CG33199-PA,
           isoform A protein.
          Length = 79

 Score = 36.7 bits (81), Expect = 0.026
 Identities = 16/60 (26%), Positives = 35/60 (58%)
 Frame = -1

Query: 571 ISFGSDIMKTTQVAQYALRLTYSQQANREKMMTRSALLLATIGLGLSTFSVRQMILNQSR 392
           ++FG     +TQ   +      +  ++  +++TRSA +LA  G+ LS+FS++Q++  + +
Sbjct: 13  LTFGQAPTLSTQATTHCSHGFTTSSSSPNRVVTRSATMLALFGIALSSFSLKQLLAKKQK 72


>AY118805-1|AAM50665.1|  159|Drosophila melanogaster GH20534p
           protein.
          Length = 159

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 510 VSLNAYWATCVVFIMSDPNDIRHPLIFANERKNSIHLNSL 629
           +SL      CV F     N++++   F+N++K  + +NSL
Sbjct: 100 ISLRKGGKRCVRFYQHQENELKNAYKFSNQKKEEVFVNSL 139


>AE014134-3253|AAF53902.1|  159|Drosophila melanogaster CG17472-PA
           protein.
          Length = 159

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 510 VSLNAYWATCVVFIMSDPNDIRHPLIFANERKNSIHLNSL 629
           +SL      CV F     N++++   F+N++K  + +NSL
Sbjct: 100 ISLRKGGKRCVRFYQHQENELKNAYKFSNQKKEEVFVNSL 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,479,362
Number of Sequences: 53049
Number of extensions: 505287
Number of successful extensions: 1041
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)