Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_L20
(735 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 26 0.32
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 25 0.74
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 25 0.98
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 2.3
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 3.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 5.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 6.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 9.1
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 26.2 bits (55), Expect = 0.32
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -1
Query: 654 ITVDLAKNPDLYNLVFYVPMLVLNTFVLISFW 559
IT LA+ + + +Y+P +++ +SFW
Sbjct: 223 ITFKLAREMGFFMMDYYIPSILIVVISWVSFW 254
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.74
Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -1
Query: 693 EEVLNTHLSDKMIITVDLAKNPDLYNLVFYVPMLVLNTFVLISFW-TEPLTMSRIWFYVA 517
+E L T + ++ ++ L +N + Y+P +++ +SFW T +R+ +
Sbjct: 220 KEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 279
Query: 516 CVVSI 502
V+++
Sbjct: 280 TVLTM 284
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 24.6 bits (51), Expect = 0.98
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 167 DKAELAVVVDKILFVVYLIVFVGM 96
D+A +AV +F YL+VF+G+
Sbjct: 231 DEASIAVGASGNVFAGYLLVFIGL 254
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 223 IHYVTRVLIFLDRVIPIGGF 282
+H V VL LDR P G F
Sbjct: 576 VHVVALVLYLLDRFSPFGRF 595
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/52 (19%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 654 ITVDLAKNPDLYNLVFYVPMLVLNTFVLISFWT-EPLTMSRIWFYVACVVSI 502
++ +L ++ + + YVP +++ +SFW T R+ + V+++
Sbjct: 236 VSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGITTVLTL 287
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 654 ITVDLAKNPD--LYNLVFYVPMLVLNTFVLISFWTE 553
+ VDL D Y ++P ++L T I+FW E
Sbjct: 290 LKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLE 325
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 654 ITVDLAKNPD--LYNLVFYVPMLVLNTFVLISFWTE 553
+ VDL D Y ++P ++L T I+FW E
Sbjct: 259 LKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLE 294
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 654 ITVDLAKNPD--LYNLVFYVPMLVLNTFVLISFWTE 553
+ VDL D Y ++P ++L T I+FW E
Sbjct: 310 LKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLE 345
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 654 ITVDLAKNPD--LYNLVFYVPMLVLNTFVLISFWTE 553
+ VDL D Y ++P ++L T I+FW E
Sbjct: 259 LKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLE 294
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/21 (33%), Positives = 9/21 (42%)
Frame = -3
Query: 712 HRPHQQRGGSEHPFK*QDDHH 650
+ PHQ HP + HH
Sbjct: 316 YHPHQHHPSQYHPHRGSSPHH 336
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.8 bits (44), Expect = 6.9
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Frame = -1
Query: 606 YVPMLVLNTFVLISFWTEP-LTMSRIWFYVACVVSICFGLCYIDYLIP----IHAIPTIM 442
Y+P ++ +SFW +P +R+ V ++++ +P + A+ M
Sbjct: 252 YIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 311
Query: 441 -VLYVTVLFGLMTAVMANVLL 382
V V V LM + N++L
Sbjct: 312 SVCTVFVFMALMEYCLVNIVL 332
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -1
Query: 684 LNTHLSDKMIITVDLAKNPDLYNLVFYVPMLVLNTFVLISFW-TEPLTMSRIWFYVACVV 508
L+T ++ + ++ Y + Y+P ++ +SFW T +R+ V V+
Sbjct: 202 LSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVL 261
Query: 507 SI 502
++
Sbjct: 262 TM 263
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,565
Number of Sequences: 438
Number of extensions: 4161
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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