Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_L13
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 1.5
U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical pr... 30 1.5
U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical pr... 30 1.5
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 29 2.6
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr... 29 3.4
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 29 4.5
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 29 4.5
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 586 TRVEGCSETLCKVDPLPATTIPVRVFRLR 672
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 586 TRVEGCSETLCKVDPLPATTIPVRVFRLR 672
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 586 TRVEGCSETLCKVDPLPATTIPVRVFRLR 672
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 586 TRVEGCSETLCKVDPLPATTIPVRVFRLR 672
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 586 TRVEGCSETLCKVDPLPATTIPVRVFRLR 672
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 586 TRVEGCSETLCKVDPLPATTIPVRVFRLR 672
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical
protein C41A3.2b protein.
Length = 526
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 339 SQKKCSLLSPKIKHMCNKLIKYWGVIAR*HSCSI 440
S+K S+++ K+ H CN + Y V A H C++
Sbjct: 205 SEKSASVINEKVNHNCNICVVYAPVAATTHVCTM 238
>U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical
protein C41A3.2a protein.
Length = 795
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 339 SQKKCSLLSPKIKHMCNKLIKYWGVIAR*HSCSI 440
S+K S+++ K+ H CN + Y V A H C++
Sbjct: 205 SEKSASVINEKVNHNCNICVVYAPVAATTHVCTM 238
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 9 QQSHVXRSAHIFIQAHNSLIRLHPST 86
Q +H+ RS H N L+ LHPST
Sbjct: 644 QVAHLERSGHYVTVKDNQLVNLHPST 669
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 9 QQSHVXRSAHIFIQAHNSLIRLHPST 86
Q +H+ RS H N L+ LHPST
Sbjct: 644 QVAHLERSGHYVTVKDNQLVNLHPST 669
>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
protein M18.5 protein.
Length = 1134
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 650 GMVVAGSGSTLHRVSEHPSTLVYYICSLL 564
G++V GS S L++ +++ +V Y CSLL
Sbjct: 223 GVIVLGSNSVLYKPNDNLGEVVPYTCSLL 251
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 719 THTTPVARAPSLYAHYLSLKTRT-GMVVAGSGSTLHRVSEHPSTLV 585
T P A AP Y+ + R G+VV G+T+ R+ + T +
Sbjct: 125 TQVVPGAHAPGQITSYVRVPLRVVGLVVGPKGATIKRIQQDTHTYI 170
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 719 THTTPVARAPSLYAHYLSLKTRT-GMVVAGSGSTLHRVSEHPSTLV 585
T P A AP Y+ + R G+VV G+T+ R+ + T +
Sbjct: 125 TQVVPGAHAPGQITSYVRVPLRVVGLVVGPKGATIKRIQQDTHTYI 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,290,976
Number of Sequences: 27780
Number of extensions: 350923
Number of successful extensions: 759
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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