Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_L11
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 328 4e-90
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 328 4e-90
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 328 4e-90
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 61 9e-10
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 57 2e-08
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 55 8e-08
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 55 8e-08
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 55 8e-08
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 42 8e-04
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 40 0.002
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 40 0.002
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 31 0.81
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 29 3.3
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical... 29 4.3
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 7.5
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 7.5
AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical ... 28 7.5
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 7.5
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 328 bits (805), Expect = 4e-90
Identities = 151/193 (78%), Positives = 169/193 (87%)
Frame = -1
Query: 857 PLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEALQEAVPGDNV 678
PLQDVY+IGGIGTVPVGRVETG++KPG +V FAP N+ TEVKSVEMHHE+L EAVPGDNV
Sbjct: 215 PLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNV 274
Query: 677 GFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 498
GFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHI
Sbjct: 275 GFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHI 334
Query: 497 ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 318
ACKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRD
Sbjct: 335 ACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRD 394
Query: 317 MRQTVAVGVIKAV 279
MRQTVAVGVIK+V
Sbjct: 395 MRQTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 328 bits (805), Expect = 4e-90
Identities = 151/193 (78%), Positives = 169/193 (87%)
Frame = -1
Query: 857 PLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEALQEAVPGDNV 678
PLQDVY+IGGIGTVPVGRVETG++KPG +V FAP N+ TEVKSVEMHHE+L EAVPGDNV
Sbjct: 249 PLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNV 308
Query: 677 GFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 498
GFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHI
Sbjct: 309 GFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHI 368
Query: 497 ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 318
ACKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRD
Sbjct: 369 ACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRD 428
Query: 317 MRQTVAVGVIKAV 279
MRQTVAVGVIK+V
Sbjct: 429 MRQTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 328 bits (805), Expect = 4e-90
Identities = 151/193 (78%), Positives = 169/193 (87%)
Frame = -1
Query: 857 PLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEALQEAVPGDNV 678
PLQDVY+IGGIGTVPVGRVETG++KPG +V FAP N+ TEVKSVEMHHE+L EAVPGDNV
Sbjct: 249 PLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNV 308
Query: 677 GFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 498
GFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHI
Sbjct: 309 GFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHI 368
Query: 497 ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 318
ACKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRD
Sbjct: 369 ACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRD 428
Query: 317 MRQTVAVGVIKAV 279
MRQTVAVGVIK+V
Sbjct: 429 MRQTVAVGVIKSV 441
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 99 bits (238), Expect = 2e-21
Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 1/184 (0%)
Frame = -1
Query: 827 IGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 648
+GTV +G++E+G ++ G +V P +V + + V GDN+ F +K +
Sbjct: 351 MGTVIIGKMESGCVQKGDTLVVMPNKQPVQVLQIWADDVETERVVAGDNIKFKLKGIEEN 410
Query: 647 ELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK 468
EL+ G++ S ++ K F A+V+VL H I++GY+ VL +A +
Sbjct: 411 ELQGGFIIC-SPDSLAKTGRVFDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIAT 469
Query: 467 VDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-V 291
+D++TG+ K +K + I+ L +P +E F+E+P LGRF +RD +T+A+G V
Sbjct: 470 IDKKTGEKKRA--KFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIAIGKV 527
Query: 290 IKAV 279
+K V
Sbjct: 528 LKVV 531
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 61.3 bits (142), Expect = 9e-10
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Frame = -1
Query: 860 FPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPAN----IXTEVKSVEMHHEALQEAV 693
F + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 375 FQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVGIVK 434
Query: 692 PGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDC 513
G + F +K + K++R+G V D K P F A+++VL+HP I Y +L
Sbjct: 435 CGQSASFALKKIPKKDVRKGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAMLHI 493
Query: 512 HTAHIACKFAEIKEKVDRRTGKSTEVNPKSIK 417
+ + ++V RTG +V K I+
Sbjct: 494 GSVRQTATLVSMGKEV-LRTGDRDKVQFKFIR 524
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Frame = -1
Query: 860 FPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPAN----IXTEVKSVEMHHEALQEAV 693
F + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 376 FQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRCLVGIVK 435
Query: 692 PGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 519
G + F +K + K++R+G V D K P F A+++VL+HP I Y +L
Sbjct: 436 CGQSASFALKKIPKKDVRQGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAML 492
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 54.8 bits (126), Expect = 8e-08
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Frame = -1
Query: 863 VFPLQDVYQIGGIGTVPVGRVETGVLKPG-TIVVFAPANIXTEVKSV----EMHHEALQE 699
+F + VY I G GTV G++E G+LK G I + T VKSV E + + +
Sbjct: 253 MFAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQ 312
Query: 698 AVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 519
A PGD +G ++ + K++RRG V + + K AQ+ VL TP+
Sbjct: 313 AEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIA 369
Query: 518 DCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPP 342
+ + H+ + +G S + K + G++A V L + + +E P
Sbjct: 370 NYFSEHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------P 415
Query: 341 LGRFAVRDMRQTVAVGVIKAV 279
RF +R +T+ GV V
Sbjct: 416 QQRFTIRKGAKTIGTGVFTDV 436
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 54.8 bits (126), Expect = 8e-08
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Frame = -1
Query: 863 VFPLQDVYQIGGIGTVPVGRVETGVLKPG-TIVVFAPANIXTEVKSV----EMHHEALQE 699
+F + VY I G GTV G++E G+LK G I + T VKSV E + + +
Sbjct: 254 MFAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQ 313
Query: 698 AVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 519
A PGD +G ++ + K++RRG V + + K AQ+ VL TP+
Sbjct: 314 AEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIA 370
Query: 518 DCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPP 342
+ + H+ + +G S + K + G++A V L + + +E P
Sbjct: 371 NYFSEHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------P 416
Query: 341 LGRFAVRDMRQTVAVGVIKAV 279
RF +R +T+ GV V
Sbjct: 417 QQRFTIRKGAKTIGTGVFTDV 437
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 54.8 bits (126), Expect = 8e-08
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Frame = -1
Query: 863 VFPLQDVYQIGGIGTVPVGRVETGVLKPG-TIVVFAPANIXTEVKSV----EMHHEALQE 699
+F + VY I G GTV G++E G+LK G I + T VKSV E + + +
Sbjct: 254 MFAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQ 313
Query: 698 AVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 519
A PGD +G ++ + K++RRG V + + K AQ+ VL TP+
Sbjct: 314 AEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIA 370
Query: 518 DCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPP 342
+ + H+ + +G S + K + G++A V L + + +E P
Sbjct: 371 NYFSEHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------P 416
Query: 341 LGRFAVRDMRQTVAVGVIKAV 279
RF +R +T+ GV V
Sbjct: 417 QQRFTIRKGAKTIGTGVFTDV 437
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 50.4 bits (115), Expect = 2e-06
Identities = 37/193 (19%), Positives = 80/193 (41%), Gaps = 1/193 (0%)
Frame = -1
Query: 854 LQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEALQEAVPGDNVG 675
+ DV ++ V G++E+G ++ V + VK +++ + GD +
Sbjct: 397 ISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSSVTAATVKECA-NNDGSRHCFAGDYIL 455
Query: 674 FNVKNVSVKE-LRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 498
++ E ++ G V + + + F +++ I G L H+ +
Sbjct: 456 LTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAKAELYAHSLCV 515
Query: 497 ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 318
C F + +++ G+ + P+ I G +A+V + + +E+F LGR R
Sbjct: 516 PCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRA 575
Query: 317 MRQTVAVGVIKAV 279
T+A G+++ V
Sbjct: 576 GGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 50.4 bits (115), Expect = 2e-06
Identities = 37/193 (19%), Positives = 80/193 (41%), Gaps = 1/193 (0%)
Frame = -1
Query: 854 LQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEALQEAVPGDNVG 675
+ DV ++ V G++E+G ++ V + VK +++ + GD +
Sbjct: 415 ISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSSVTAATVKECA-NNDGSRHCFAGDYIL 473
Query: 674 FNVKNVSVKE-LRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 498
++ E ++ G V + + + F +++ I G L H+ +
Sbjct: 474 LTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAKAELYAHSLCV 533
Query: 497 ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 318
C F + +++ G+ + P+ I G +A+V + + +E+F LGR R
Sbjct: 534 PCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRA 593
Query: 317 MRQTVAVGVIKAV 279
T+A G+++ V
Sbjct: 594 GGNTIAAGIVEKV 606
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 41.5 bits (93), Expect = 8e-04
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = -1
Query: 860 FPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANIXT----EVKSVEMHHEALQEAV 693
F ++++Y + +G V G + G L G V+ P T V S+ +A+
Sbjct: 405 FTIEELYNVPHVGQVVGGMLSEGQLHEGADVLVGPMKDGTFEKITVGSIRRSRQAVGCVN 464
Query: 692 PGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 555
PG+ ++ LRRG V + + PP +FTA +++L H
Sbjct: 465 PGEAASISLNLPDGVSLRRGMVLAEIDHQPPV-CYEFTANLLLLCH 509
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = -1
Query: 863 VFPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFA--PANIXTEVKSVEMHHEALQEAVP 690
V P+ I G GTV VG +E GVLK G V + T +++ ++++E
Sbjct: 241 VMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRA 300
Query: 689 GDNVGFNVKNVSVKELRRGYVAG 621
GD+ G + V ++RG AG
Sbjct: 301 GDHCGVLCRGVKGDTVKRGMWAG 323
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = -1
Query: 863 VFPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFA--PANIXTEVKSVEMHHEALQEAVP 690
V P+ I G GTV VG +E GVLK G V + T +++ ++++E
Sbjct: 241 VMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRA 300
Query: 689 GDNVGFNVKNVSVKELRRGYVAG 621
GD+ G + V ++RG AG
Sbjct: 301 GDHCGVLCRGVKGDTVKRGMWAG 323
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.81
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -1
Query: 842 YQIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEALQEAVPGDNVGFNV 666
+ I G GTV G V GVL+ T + F N VK++E + + + G F V
Sbjct: 210 FAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFLV 268
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 31.5 bits (68), Expect = 0.81
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -1
Query: 842 YQIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEALQEAVPGDNVGFNV 666
+ I G GTV G V GVL+ T + F N VK++E + + + G F V
Sbjct: 169 FAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFLV 227
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 31.5 bits (68), Expect = 0.81
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 562 STMT*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPG-TASWRASWCISTDLT 738
ST T A+ + P ++ P + FT +S + S R S +S D T
Sbjct: 4 STATVAIIQSEPSTSSSSSPSSSRPEDGATVGNTFTQSSAVSESQSTSERTSRSVSPDST 63
Query: 739 SVXMLAGAKTTMVPGFN--TPVSTLPTGTVPIPPIWY 843
V + + VP + VST PT +PPI Y
Sbjct: 64 PVRVTTSTLLSTVPTSQDISGVSTAPTTKATLPPITY 100
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = +1
Query: 553 GWLSTMT*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASW---CI 723
G ST T A S AP GGLF + T P + T F T +P T
Sbjct: 446 GASSTTTPA--STAPTGGLFGAATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAAT 503
Query: 724 STDLTSVXMLAGAKTTMVPGFNTPVSTLPTGTVPIP 831
+T + L +T+ + P +T T T+P P
Sbjct: 504 TTTPATAATLGQTPSTVSATPSLPTTTSTTSTLPKP 539
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 163 MKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLM 318
M Y +C ++N Y L ++A+V LPPP ++ + ++ A C++
Sbjct: 188 MMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIPCII 237
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +1
Query: 217 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 369
+P+V + L PPP L +LM P TV + R K P G NS K T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177
>AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical
protein Y75B8A.33 protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 138 KRATNSFLFYIFYKACNVTLFYNLYKVIHNISETFC 31
KR NS++F I+ C + F Y++ + +C
Sbjct: 262 KRDVNSYVFVIWGVVCQILFFLTTYRIAELVVRIYC 297
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 521 LDCHTAHIACKFAEIKEKVDRRTGKSTE 438
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 521 LDCHTAHIACKFAEIKEKVDRRTGKSTE 438
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical
protein Y53H1A.3 protein.
Length = 201
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +3
Query: 741 SXDVGGGKDNNGTWF--QHTS---FNSADGHGTNTTDLVY 845
S +V GK ++G W Q TS F DGH T T +V+
Sbjct: 97 SLNVAAGKTHSGVWLGAQRTSATAFRWTDGHTTGTEAMVF 136
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 521 LDCHTAHIACKFAEIKEKVDRRTGKSTE 438
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,145,792
Number of Sequences: 27780
Number of extensions: 440696
Number of successful extensions: 1322
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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