Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_L07
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908     28   9.2  
03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009     28   9.2  
01_07_0251 + 42289617-42291241,42291424-42292156                       28   9.2  

>06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908
          Length = 88

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -3

Query: 445 KGEILYPGDVKIKVAEPKGLNALHLE-DVIYKTLVYDKKEDEP 320
           KG +   G   I +  PK LNA++LE D+ YK  + D+ E  P
Sbjct: 11  KGRVTPNGVAVITLDRPKALNAMNLEMDLRYKAFL-DEWETNP 52


>03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009
          Length = 768

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 419 REDQGRGTKRPERASLGRR 363
           RED+ RG++RPER   G R
Sbjct: 289 REDELRGSRRPERGERGNR 307


>01_07_0251 + 42289617-42291241,42291424-42292156
          Length = 785

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +1

Query: 553 ARREPVAETRTELMNKRGQFPSCFYPELYVFLAPLRLKQPHPVRL 687
           +R E +A T TE+  +     +C   +L V L  + L Q  P+R+
Sbjct: 694 SRIEKLATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRV 738


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,911,441
Number of Sequences: 37544
Number of extensions: 268783
Number of successful extensions: 520
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)