Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_L05
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical ... 38 0.006
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 34 0.072
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 34 0.072
Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 32 0.29
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 32 0.29
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 32 0.29
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 32 0.29
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 32 0.29
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 32 0.29
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 31 0.51
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 30 1.2
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 28 4.7
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical ... 28 6.2
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 27 8.2
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 27 8.2
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 27 8.2
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 27 8.2
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 27 8.2
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 27 8.2
AC006723-3|AAF59427.1| 881|Caenorhabditis elegans Hypothetical ... 27 8.2
>AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical
protein C10B5.1 protein.
Length = 311
Score = 37.9 bits (84), Expect = 0.006
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = -2
Query: 525 IFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLT 346
I+ L R DLS ++ G + + + K +G WDG IR+FS + L+ LT
Sbjct: 217 IYLLNRYDLSKQ-EIPYPPDAAGCSAISFSPNSKQIIAGFWDGSIRVFSRHRLNVLLALT 275
Query: 345 E-HKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDL 232
H I + + + + I+ A D ++LW L
Sbjct: 276 NAHSSTISSIIWLPPE----QGEIVIATSSDSTVSLWKL 310
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Frame = -2
Query: 435 SDGKVFTSGGWDGHIRIFSW--------FSMRPLVVLTEHKQAIQDVAYSTEKVSL 292
S GK+F +GG DGHIRI++ +P++ + HK + D+ +S + ++
Sbjct: 154 SRGKIFATGGADGHIRIWNAQIVFRAENEDAQPILTIQAHKADVDDIDFSKDSKTI 209
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 34.3 bits (75), Expect = 0.072
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = -2
Query: 552 IGNASNVIQIFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWF 373
IG A +++FN +D + + +N ++ SDG +F +GG DG I ++
Sbjct: 77 IGYADGSVKLFNQENEDSEPIM---FSGHKKAVNCIEFSSDGLLFATGGKDGVIVLWDIL 133
Query: 372 SMRPLVVLTEHKQAIQDVAY 313
+ R + L HK+++ + +
Sbjct: 134 AERGMFRLHGHKESVTQMKF 153
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = -2
Query: 456 INKVKTRSDGKVFTSGGWDGHIRIFSWFSM-RPLVVLTEHKQAIQDVAYSTEKVSLWKAY 280
I+ V+ + + G DG +++F+ + ++ + HK+A+ + +S++ +
Sbjct: 63 ISCVRQCENKPLLAIGYADGSVKLFNQENEDSEPIMFSGHKKAVNCIEFSSDGL------ 116
Query: 279 IMAAGGLDGAITLWDL 232
+ A GG DG I LWD+
Sbjct: 117 LFATGGKDGVIVLWDI 132
>Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical
protein C08B6.7 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = -2
Query: 435 SDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLD 256
SDGK+ + DG +RIF++ + L V+ + + +++S + A ++A GG D
Sbjct: 315 SDGKMMATVSHDGFLRIFNYHAQELLAVMKSYFGGLLTLSWSPD------AKLIATGGED 368
Query: 255 GAITLWDL 232
+T++ +
Sbjct: 369 DLLTVYSV 376
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -2
Query: 423 VFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAIT 244
VF S G D + ++ +P + H + + ++ + YI+A G +D +
Sbjct: 236 VFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNP-----FSEYILATGSVDKTVA 290
Query: 243 LWDLYNSKQ 217
LWD+ N ++
Sbjct: 291 LWDMRNMRK 299
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = -2
Query: 456 INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYI 277
++ V DG + SG +DG +RI+ + + + L + + VA+ K S YI
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN--PPVAF--VKFSPNGKYI 271
Query: 276 MAAGGLDGAITLWDLYNSK 220
+A+ LD + LWD K
Sbjct: 272 LAS-NLDSTLKLWDFSKGK 289
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/105 (20%), Positives = 44/105 (41%)
Frame = -2
Query: 546 NASNVIQIFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSM 367
+A ++I+N+ TL T G+N + SD + S D ++IF +
Sbjct: 106 SADKTVKIWNMDHMICERTL----TGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTS 161
Query: 366 RPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDL 232
R L H + ++ + + ++ +G D ++ +WD+
Sbjct: 162 RMTKTLKGHNNYVFCCNFNPQ------SSLVVSGSFDESVRIWDV 200
Score = 27.5 bits (58), Expect = 8.2
Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Frame = -2
Query: 624 CISKLQVXECPMS-VDYHLEQQRGIIGNASNVIQIFNLGRKDLSLTLKLDVTIKNPGINK 448
CI L P+S V ++ + G+ +++I++ TL D +NP +
Sbjct: 205 CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD---ENPPVAF 261
Query: 447 VKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAA 268
VK +GK + D ++++ + + L T H+ + + ++ V+ K I +
Sbjct: 262 VKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENS-KYCIFANFSVTGGKWII--S 318
Query: 267 GGLDGAITLWDL 232
G D I +W+L
Sbjct: 319 GSEDCKIYIWNL 330
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/113 (22%), Positives = 50/113 (44%)
Frame = -2
Query: 555 IIGNASNVIQIFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSW 376
+IG ++ + +++L + +L L+ D + + D K+ + DG+I I+
Sbjct: 390 LIGGEASTVALWDLTTETKTLDLETD----SQACYALAMSPDEKLLFACLADGNILIYDI 445
Query: 375 FSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSKQ 217
+ + L H+ + S + LW +GGLD ++ WDL K+
Sbjct: 446 HNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDLAQRKE 492
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/113 (22%), Positives = 50/113 (44%)
Frame = -2
Query: 555 IIGNASNVIQIFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSW 376
+IG ++ + +++L + +L L+ D + + D K+ + DG+I I+
Sbjct: 390 LIGGEASTVALWDLTTETKTLDLETD----SQACYALAMSPDEKLLFACLADGNILIYDI 445
Query: 375 FSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSKQ 217
+ + L H+ + S + LW +GGLD ++ WDL K+
Sbjct: 446 HNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDLAQRKE 492
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/113 (22%), Positives = 50/113 (44%)
Frame = -2
Query: 555 IIGNASNVIQIFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSW 376
+IG ++ + +++L + +L L+ D + + D K+ + DG+I I+
Sbjct: 390 LIGGEASTVALWDLTTETKTLDLETD----SQACYALAMSPDEKLLFACLADGNILIYDI 445
Query: 375 FSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSKQ 217
+ + L H+ + S + LW +GGLD ++ WDL K+
Sbjct: 446 HNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDLAQRKE 492
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/113 (22%), Positives = 50/113 (44%)
Frame = -2
Query: 555 IIGNASNVIQIFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSW 376
+IG ++ + +++L + +L L+ D + + D K+ + DG+I I+
Sbjct: 390 LIGGEASTVALWDLTTETKTLDLETD----SQACYALAMSPDEKLLFACLADGNILIYDI 445
Query: 375 FSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSKQ 217
+ + L H+ + S + LW +GGLD ++ WDL K+
Sbjct: 446 HNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDLAQRKE 492
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2
Query: 351 LTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWD 235
LT HK++++D+A+S + L +A+ DG+I LWD
Sbjct: 271 LTGHKKSVEDLAWSPTETGL-----LASCSADGSIKLWD 304
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -2
Query: 456 INKVKTRSDGKVFTSGGWDGHIRIFSWFSM---RPLVVLTEHKQAIQDVAYSTEKVSLWK 286
+N + + SGG DG ++I+S ++ +P+ + H I V + + + +
Sbjct: 325 VNVISWNRHENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTF- 383
Query: 285 AYIMAAGGLDGAITLWDL 232
A G D T+WD+
Sbjct: 384 ----MASGEDDQTTIWDI 397
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 31.1 bits (67), Expect = 0.67
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -2
Query: 432 DGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDG 253
DG V +GG D + R++ + R ++ L H + I V + + Y M G D
Sbjct: 349 DGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEW------MPNGYEMITGSSDN 402
Query: 252 AITLWDL 232
++ +WDL
Sbjct: 403 SMKVWDL 409
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -2
Query: 423 VFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAIT 244
V S GWD +++++ + R H + V S + + A+GG DG
Sbjct: 170 VIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPD------GSLCASGGKDGQAM 223
Query: 243 LWDLYNSK 220
LWDL K
Sbjct: 224 LWDLNEGK 231
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = -2
Query: 477 VTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKV 298
+T N ++ V SDG+ SG WD +R++ H + + VA+S +
Sbjct: 65 LTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNR 124
Query: 297 SLWKAYIMAAGGLDGAITLWD 235
+ +G D +I LW+
Sbjct: 125 QI------VSGSRDKSIKLWN 139
Score = 29.5 bits (63), Expect = 2.0
Identities = 27/106 (25%), Positives = 49/106 (46%)
Frame = -2
Query: 534 VIQIFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLV 355
V++++NLG + LK + +N V DG + SGG DG ++ + L
Sbjct: 179 VVKVWNLG----NCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY 234
Query: 354 VLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSKQ 217
L + I +++S + ++ AA G +I +WDL + K+
Sbjct: 235 TLPGN-DVINAMSFSPNRY-----WLCAAVG--SSIKIWDLEDKKE 272
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/71 (22%), Positives = 32/71 (45%)
Frame = -2
Query: 447 VKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAA 268
+K D ++ SGG D + +++ P+ T+H A++ +A+S L +
Sbjct: 528 LKWSPDKQLLASGGNDNQLLVWNLRRNEPIQTYTQHNAAVKALAWSPHHHGL---LVSGG 584
Query: 267 GGLDGAITLWD 235
G D + W+
Sbjct: 585 GTADRCLRFWN 595
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 28.7 bits (61), Expect = 3.6
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = -2
Query: 456 INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYI 277
+N + S G+ G W +RI+ S + E + + V + E W
Sbjct: 84 VNALSLTSTGRDLAVGAWQ-KVRIYDVSSGKDPKATIELPKNVTVVGF--EAAGRW---- 136
Query: 276 MAAGGLDGAITLWDLYNSKQ*NDQIMLYCDLQV-MICHSLCQFCLYTSTNA 127
M GG DG +W++ N++ ++++ + V I + Q L+ STN+
Sbjct: 137 MYTGGDDGVCRIWEMRNNQLVANRLLSFPGSTVTSIVPNTHQTHLFVSTNS 187
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 4.7
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 486 KLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYST 307
KLD + + I V DG+ +G +G I I+ F + L A++ VA
Sbjct: 2400 KLDEVLVDDKIECVTVTRDGEFAVTGAVNGRINIWRMFPLTKLYTYQPLNSAVRSVA--- 2456
Query: 306 EKVSLWKAYIMAAGGLD-GAITLWD 235
V +I+ GGLD GAI +++
Sbjct: 2457 --VVASHRFIL--GGLDSGAIVVFN 2477
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 4.7
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 486 KLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYST 307
KLD + + I V DG+ +G +G I I+ F + L A++ VA
Sbjct: 2400 KLDEVLVDDKIECVTVTRDGEFAVTGAVNGRINIWRMFPLTKLYTYQPLNSAVRSVA--- 2456
Query: 306 EKVSLWKAYIMAAGGLD-GAITLWD 235
V +I+ GGLD GAI +++
Sbjct: 2457 --VVASHRFIL--GGLDSGAIVVFN 2477
>AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical
protein Y54G9A.6 protein.
Length = 343
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 273 AAGGLDGAITLWDLYNSKQ 217
A GG DG + +WD +N K+
Sbjct: 267 ATGGADGIVNIWDPFNRKR 285
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2
Query: 375 FSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDL 232
F +P +L H I DV++S K Y + + G+D + LW L
Sbjct: 705 FCAKPFALLKGHTADILDVSWS-------KNYFILSSGMDRTVKLWHL 745
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 282 YIMAAGGLDGAITLWDLYNSK 220
+++A+GG D + LWDL +K
Sbjct: 260 HVLASGGADKTVVLWDLDEAK 280
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 591 MSVDYHLEQQRGIIGNASNVIQIFNLGRKDLS--LTLKLDVT 472
MS+ Y + + I GNA +++ FN R+D + +K D T
Sbjct: 97 MSLCYRVSEAHAITGNAHSILLAFNKTREDQPSIIYIKADTT 138
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 591 MSVDYHLEQQRGIIGNASNVIQIFNLGRKDLS--LTLKLDVT 472
MS+ Y + + I GNA +++ FN R+D + +K D T
Sbjct: 97 MSLCYRVSEAHAITGNAHSILLAFNKTREDQPSIIYIKADTT 138
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2
Query: 375 FSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDL 232
F +P +L H I DV++S K Y + + G+D + LW L
Sbjct: 705 FCAKPFALLKGHTADILDVSWS-------KNYFILSSGMDRTVKLWHL 745
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 591 MSVDYHLEQQRGIIGNASNVIQIFNLGRKDLS--LTLKLDVT 472
MS+ Y + + I GNA +++ FN R+D + +K D T
Sbjct: 97 MSLCYRVSEAHAITGNAHSILLAFNKTREDQPSIIYIKADTT 138
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 591 MSVDYHLEQQRGIIGNASNVIQIFNLGRKDLS--LTLKLDVT 472
MS+ Y + + I GNA +++ FN R+D + +K D T
Sbjct: 97 MSLCYRVSEAHAITGNAHSILLAFNKTREDQPSIIYIKADTT 138
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = -2
Query: 402 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDL 232
D +RI++W S + +LT H + + + ++A+ LD + +WD+
Sbjct: 116 DQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTE------DLVASASLDQTVRVWDI 166
>AC006723-3|AAF59427.1| 881|Caenorhabditis elegans Hypothetical
protein Y19D10B.4 protein.
Length = 881
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 498 SLTLKLDVTIKNPGINKVKTRSDGKVFTSGGW 403
S+++ VT KNP N + R D K+F SG W
Sbjct: 673 SVSISNYVTYKNP--NFMSIRIDSKLFASGKW 702
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,367,539
Number of Sequences: 27780
Number of extensions: 258132
Number of successful extensions: 632
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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