Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_L04
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77666-3|CAB01225.1|  698|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>Z77666-3|CAB01225.1|  698|Caenorhabditis elegans Hypothetical
           protein K08E7.3 protein.
          Length = 698

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 91  SRDTPACGPVXTNYGRPVIISAENHVNL 8
           SRD PACG   + Y R  +   +N VNL
Sbjct: 499 SRDLPACGIRASKYRRRALSPFDNRVNL 526


>Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical
           protein F20C5.5 protein.
          Length = 688

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +3

Query: 627 EIVQLLMRKDEVSNISRYIDSLNNSRVVLKLNNK 728
           +I+Q L  +DEV  +++ ++SLN S++V  L NK
Sbjct: 254 QIIQKL--EDEVDYLTKNLESLNPSQLVTSLENK 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,549,520
Number of Sequences: 27780
Number of extensions: 262134
Number of successful extensions: 485
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)