Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_L02
(646 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 51 3e-08
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 38 2e-04
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 25 2.0
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 25 2.7
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 24 3.6
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 6.3
AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding pr... 23 6.3
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 23 8.3
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 23 8.3
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 23 8.3
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 23 8.3
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 51.2 bits (117), Expect = 3e-08
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Frame = -1
Query: 640 INRLETIQTXFMRF----LQFKTKVYDPDYETRCRRHHILPLEERRRIADIVLYSKIAQS 473
I R+E IQ R+ L ++ + P Y RCR + PL RRR A + +
Sbjct: 915 IARIEAIQRKLTRYALRLLPWQDRNNLPPYAARCRLLGLEPLSVRRRNAQCSFIAGLLNG 974
Query: 472 GVDSSYLLSLLCLRVPPRPIMRESRQSSRLGVPRGGTNYRRNAFFIRAASSFNALADFPE 293
+DSS LL + + P R + SR++ RL PR R + F R ++ FN ++D +
Sbjct: 975 SIDSSPLLHRVDIYAPSRTL--RSRETLRLAQPRSSAG-RSDPMF-RMSAVFNTVSDCFD 1030
Query: 292 LDIFNTSTKSIRRTL 248
DI K R L
Sbjct: 1031 FDISTQCFKERLRLL 1045
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 38.3 bits (85), Expect = 2e-04
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Frame = -1
Query: 637 NRLETIQTXFMR--FLQFKTKVYDPDYETRCRRHHILPLEERRRIADIVLYSKIAQSGVD 464
+R+E+IQ F R F + P YETR + ++ L RR+++ + S D
Sbjct: 845 SRIESIQRLFTRVAFRRLFGAASLPPYETRLQLFNLHSLSFRRQVSQACFIGGLLLSDTD 904
Query: 463 SSYLLSLLCLRVPPRPIMRESRQSSRLGVPRGGTNYRRNAFFIRAASSFNALADFPELDI 284
+ LLS + L VP R + R L + T Y N + S F F L
Sbjct: 905 APDLLSSISLYVPSRSL----RPRDPLSIETRHTLYTFNDPIL---SCFRLFNHFYYLFD 957
Query: 283 FNTSTKSIRRTLVS 242
F++S S R + S
Sbjct: 958 FDSSLNSFRNRIFS 971
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 25.0 bits (52), Expect = 2.0
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -1
Query: 487 KIAQSGVDSSYLLSLLCLRVPPRPIMRESRQSSRLGVPRGGT-NYRRNAFFIRAASS 320
K Q G +S L + +R P P + R G PR G N++ + F + ASS
Sbjct: 209 KAGQVGAPASRLDGNVQVREAPGPGEKARRSDPAAGCPRSGQGNFQLSPDFRQRASS 265
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 24.6 bits (51), Expect = 2.7
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +1
Query: 430 PLNITTIEDKTSPPQTELFCYKEQYQLSYVFPPVEVC 540
PLNI + + P + FCY ++ ++ V + +C
Sbjct: 2346 PLNIAELVKEPKPLKAIDFCYHDEDEMVTVLDCITLC 2382
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 24.2 bits (50), Expect = 3.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 533 KYVMPSTSRLVVGIIHFSFKLKKP 604
K V+PS +R +VGI+ ++ KP
Sbjct: 155 KKVLPSANRAMVGIVAGGGRIDKP 178
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.4 bits (48), Expect = 6.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 430 PLNITT-IEDKTSPPQTELFCYKEQYQLSYVFP 525
P +IT ++ + CY EQ+ LSYVFP
Sbjct: 3070 PFHITNCFRTNSADNLNTITCY-EQHGLSYVFP 3101
>AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding
protein AgamOBP40 protein.
Length = 282
Score = 23.4 bits (48), Expect = 6.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 607 MRFLQFKTKVYDPDYETRC 551
+R Q+K VY PD +T C
Sbjct: 54 LRLDQYKKFVYPPDRDTMC 72
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.0 bits (47), Expect = 8.3
Identities = 14/60 (23%), Positives = 24/60 (40%)
Frame = -1
Query: 496 LYSKIAQSGVDSSYLLSLLCLRVPPRPIMRESRQSSRLGVPRGGTNYRRNAFFIRAASSF 317
L + + SG + LL+ L R PP + + + GVP R +++ F
Sbjct: 128 LLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQLRARCAYVQQDDLF 187
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.0 bits (47), Expect = 8.3
Identities = 14/60 (23%), Positives = 24/60 (40%)
Frame = -1
Query: 496 LYSKIAQSGVDSSYLLSLLCLRVPPRPIMRESRQSSRLGVPRGGTNYRRNAFFIRAASSF 317
L + + SG + LL+ L R PP + + + GVP R +++ F
Sbjct: 128 LLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQLRARCAYVQQDDLF 187
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 23.0 bits (47), Expect = 8.3
Identities = 14/60 (23%), Positives = 24/60 (40%)
Frame = -1
Query: 496 LYSKIAQSGVDSSYLLSLLCLRVPPRPIMRESRQSSRLGVPRGGTNYRRNAFFIRAASSF 317
L + + SG + LL+ L R PP + + + GVP R +++ F
Sbjct: 106 LLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQLRARCAYVQQDDLF 165
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.0 bits (47), Expect = 8.3
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 487 CYKEQYQLSYVFP 525
CY EQ+ LSYVFP
Sbjct: 3093 CY-EQHGLSYVFP 3104
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,161
Number of Sequences: 2352
Number of extensions: 9370
Number of successful extensions: 33
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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