Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_L01
         (322 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   8.6  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    21   8.6  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    21   8.6  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    21   8.6  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 204 LAKIRGLVTYKISAHEQRAYAGAISNG 124
           +AK+  LV YK   H  R+Y     +G
Sbjct: 626 IAKVFELVIYKNLLHACRSYLSPYQHG 652


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = -2

Query: 129 NGIPNIFRRFRESVFKVAP----PFIIGYLIYEGVEREXHRRDTEE 4
           NG+P++     ES+  VAP    PF +   I+  +  + H +  +E
Sbjct: 455 NGLPSVMSGLDESLSDVAPRKKYPFELEKAIHNVMFIQHHMQRQDE 500


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 161 MNNEHMLELFQMVF 120
           +NNEH+ E F  ++
Sbjct: 410 LNNEHVFEAFDRIY 423


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 161 MNNEHMLELFQMVF 120
           +NNEH+ E F  ++
Sbjct: 410 LNNEHVFEAFDRIY 423


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,630
Number of Sequences: 2352
Number of extensions: 5792
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21613350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)