Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_K24
         (659 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0051 - 345125-345693,345833-346925                               31   0.61 
03_05_0737 + 27258320-27259007,27259263-27259435,27262684-272627...    28   5.7  

>05_01_0051 - 345125-345693,345833-346925
          Length = 553

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 21/56 (37%), Positives = 26/56 (46%)
 Frame = +1

Query: 112 HYFLLLQGWL*S*GTAPMVHSVQSV*TLVPTQGVRPPHASAHRHNELLHIHLEGSP 279
           H FLL +G L    T   +  + S  T   T   RP HA AH H+ LL + L   P
Sbjct: 35  HAFLLRRGLLLGHRTTAGI--LLSAATSTATSASRPAHAHAHAHSHLLRLLLHHLP 88


>03_05_0737 +
           27258320-27259007,27259263-27259435,27262684-27262758,
           27262832-27263296
          Length = 466

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 485 VIYDFESV*ARGYVHASDIDKVSKLSAV 568
           + YD+ +  A   +H SD+DKVS L+A+
Sbjct: 160 ITYDYVTEDAADLLHQSDLDKVSALAAL 187


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,426,571
Number of Sequences: 37544
Number of extensions: 367542
Number of successful extensions: 769
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)