Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_K24
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000617-1|AAH00617.1| 264|Homo sapiens NADH dehydrogenase (ubi... 303 4e-82
AF200954-1|AAG17541.1| 264|Homo sapiens NADH dehydrogenase-ubiq... 303 4e-82
AF100743-1|AAD40386.1| 263|Homo sapiens NADH-Ubiquinone reducta... 303 4e-82
AF067139-1|AAC27451.1| 264|Homo sapiens NADH:ubiquinone oxidore... 303 4e-82
AK223255-1|BAD96975.1| 264|Homo sapiens NADH dehydrogenase (ubi... 301 1e-81
AL135819-1|CAB63881.1| 190|Homo sapiens hypothetical protein pr... 301 2e-81
>BC000617-1|AAH00617.1| 264|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q
reductas protein.
Length = 264
Score = 303 bits (743), Expect = 4e-82
Identities = 136/188 (72%), Positives = 163/188 (86%), Gaps = 4/188 (2%)
Frame = -2
Query: 658 QKVQLTAGNELEVXIPPDAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNIL 479
Q+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+L
Sbjct: 74 QQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLL 133
Query: 478 SVRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGF 299
S+R+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGF
Sbjct: 134 SLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGF 193
Query: 298 EGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELSAPWEQFPNFRANP---- 131
EGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L++PWE FP +R P
Sbjct: 194 EGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPESLK 253
Query: 130 VTAGSSEP 107
+ AG +P
Sbjct: 254 LEAGDKKP 261
>AF200954-1|AAG17541.1| 264|Homo sapiens NADH
dehydrogenase-ubiquinone 30 kDa subunit protein.
Length = 264
Score = 303 bits (743), Expect = 4e-82
Identities = 136/188 (72%), Positives = 163/188 (86%), Gaps = 4/188 (2%)
Frame = -2
Query: 658 QKVQLTAGNELEVXIPPDAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNIL 479
Q+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+L
Sbjct: 74 QQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLL 133
Query: 478 SVRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGF 299
S+R+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGF
Sbjct: 134 SLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGF 193
Query: 298 EGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELSAPWEQFPNFRANP---- 131
EGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L++PWE FP +R P
Sbjct: 194 EGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPESLK 253
Query: 130 VTAGSSEP 107
+ AG +P
Sbjct: 254 LEAGDKKP 261
>AF100743-1|AAD40386.1| 263|Homo sapiens NADH-Ubiquinone reductase
protein.
Length = 263
Score = 303 bits (743), Expect = 4e-82
Identities = 136/188 (72%), Positives = 163/188 (86%), Gaps = 4/188 (2%)
Frame = -2
Query: 658 QKVQLTAGNELEVXIPPDAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNIL 479
Q+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+L
Sbjct: 73 QQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLL 132
Query: 478 SVRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGF 299
S+R+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGF
Sbjct: 133 SLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGF 192
Query: 298 EGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELSAPWEQFPNFRANP---- 131
EGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L++PWE FP +R P
Sbjct: 193 EGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPESLK 252
Query: 130 VTAGSSEP 107
+ AG +P
Sbjct: 253 LEAGDKKP 260
>AF067139-1|AAC27451.1| 264|Homo sapiens NADH:ubiquinone
oxidoreductase NDUFS3 subunit protein.
Length = 264
Score = 303 bits (743), Expect = 4e-82
Identities = 136/188 (72%), Positives = 163/188 (86%), Gaps = 4/188 (2%)
Frame = -2
Query: 658 QKVQLTAGNELEVXIPPDAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNIL 479
Q+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+L
Sbjct: 74 QQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLL 133
Query: 478 SVRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGF 299
S+R+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGF
Sbjct: 134 SLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGF 193
Query: 298 EGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELSAPWEQFPNFRANP---- 131
EGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L++PWE FP +R P
Sbjct: 194 EGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPESLK 253
Query: 130 VTAGSSEP 107
+ AG +P
Sbjct: 254 LEAGDKKP 261
>AK223255-1|BAD96975.1| 264|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q
reductas protein.
Length = 264
Score = 301 bits (739), Expect = 1e-81
Identities = 135/188 (71%), Positives = 163/188 (86%), Gaps = 4/188 (2%)
Frame = -2
Query: 658 QKVQLTAGNELEVXIPPDAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNIL 479
Q+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+L
Sbjct: 74 QQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLL 133
Query: 478 SVRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGF 299
S+R+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGF
Sbjct: 134 SLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGF 193
Query: 298 EGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELSAPWEQFPNFRANP---- 131
EGHPF+KDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L++PWE FP +R P
Sbjct: 194 EGHPFQKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPESLK 253
Query: 130 VTAGSSEP 107
+ AG +P
Sbjct: 254 LEAGDKKP 261
>AL135819-1|CAB63881.1| 190|Homo sapiens hypothetical protein
protein.
Length = 190
Score = 301 bits (738), Expect = 2e-81
Identities = 135/187 (72%), Positives = 162/187 (86%), Gaps = 4/187 (2%)
Frame = -2
Query: 655 KVQLTAGNELEVXIPPDAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILS 476
+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LS
Sbjct: 1 QVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLS 60
Query: 475 VRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGFE 296
+R+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGFE
Sbjct: 61 LRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFE 120
Query: 295 GHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELSAPWEQFPNFRANP----V 128
GHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFR+F+L++PWE FP +R P +
Sbjct: 121 GHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPESLKL 180
Query: 127 TAGSSEP 107
AG +P
Sbjct: 181 EAGDKKP 187
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,220,351
Number of Sequences: 237096
Number of extensions: 2022660
Number of successful extensions: 3250
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3250
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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