Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_K24
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97403-5|AAO21397.1| 268|Caenorhabditis elegans Hypothetical pr... 285 3e-77
U97403-4|AAB52474.2| 445|Caenorhabditis elegans Hypothetical pr... 285 3e-77
Z72503-8|CAJ85752.1| 341|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical pr... 31 0.96
U23510-10|AAC46780.1| 979|Caenorhabditis elegans Hypothetical p... 31 0.96
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF117337-1|AAD22029.1| 277|Caenorhabditis elegans Hus1-like pro... 28 5.1
AF106587-2|AAC78225.1| 277|Caenorhabditis elegans Human hus1 re... 28 5.1
>U97403-5|AAO21397.1| 268|Caenorhabditis elegans Hypothetical
protein T10E9.7b protein.
Length = 268
Score = 285 bits (698), Expect = 3e-77
Identities = 126/180 (70%), Positives = 150/180 (83%)
Frame = -2
Query: 658 QKVQLTAGNELEVXIPPDAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNIL 479
QKVQ AG+ELE+ I P V+PVLSFLK +HSAQF NL I GMDVP+R NR E+IY++
Sbjct: 71 QKVQFAAGDELELLIHPSGVVPVLSFLKGNHSAQFTNLTFITGMDVPTRKNRLEVIYSLY 130
Query: 478 SVRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGF 299
SVR+NAR+RV+TYTDE+ P+DSA VFK A+W+ERE++DMYGV+F NHPDLRRILTDYGF
Sbjct: 131 SVRFNARVRVRTYTDEIAPIDSATPVFKGADWFEREVYDMYGVWFNNHPDLRRILTDYGF 190
Query: 298 EGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELSAPWEQFPNFRANPVTAG 119
EGHPFRKD+PLSGY EVRYD E KRVV EP ELAQEFR+F+L+ PWE FP FR +T+G
Sbjct: 191 EGHPFRKDYPLSGYNEVRYDPELKRVVYEPSELAQEFRKFDLNTPWETFPAFRNQSITSG 250
>U97403-4|AAB52474.2| 445|Caenorhabditis elegans Hypothetical
protein T10E9.7a protein.
Length = 445
Score = 285 bits (698), Expect = 3e-77
Identities = 126/180 (70%), Positives = 150/180 (83%)
Frame = -2
Query: 658 QKVQLTAGNELEVXIPPDAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNIL 479
QKVQ AG+ELE+ I P V+PVLSFLK +HSAQF NL I GMDVP+R NR E+IY++
Sbjct: 248 QKVQFAAGDELELLIHPSGVVPVLSFLKGNHSAQFTNLTFITGMDVPTRKNRLEVIYSLY 307
Query: 478 SVRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGF 299
SVR+NAR+RV+TYTDE+ P+DSA VFK A+W+ERE++DMYGV+F NHPDLRRILTDYGF
Sbjct: 308 SVRFNARVRVRTYTDEIAPIDSATPVFKGADWFEREVYDMYGVWFNNHPDLRRILTDYGF 367
Query: 298 EGHPFRKDFPLSGYVEVRYDDEQKRVVVEPLELAQEFRRFELSAPWEQFPNFRANPVTAG 119
EGHPFRKD+PLSGY EVRYD E KRVV EP ELAQEFR+F+L+ PWE FP FR +T+G
Sbjct: 368 EGHPFRKDYPLSGYNEVRYDPELKRVVYEPSELAQEFRKFDLNTPWETFPAFRNQSITSG 427
>Z72503-8|CAJ85752.1| 341|Caenorhabditis elegans Hypothetical
protein C26C6.4b protein.
Length = 341
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 368 DLSFVPICGLEYIAG*VYRSQLVSVSFDSYSGIVTYRKY 484
D+ IC LE+I G + S+LV++SFD+ S ++ KY
Sbjct: 46 DIFLNHICNLEFIPGAL--SRLVAISFDTPSHLILKEKY 82
>Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical
protein C26C6.4a protein.
Length = 424
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 368 DLSFVPICGLEYIAG*VYRSQLVSVSFDSYSGIVTYRKY 484
D+ IC LE+I G + S+LV++SFD+ S ++ KY
Sbjct: 129 DIFLNHICNLEFIPGAL--SRLVAISFDTPSHLILKEKY 165
>U23510-10|AAC46780.1| 979|Caenorhabditis elegans Hypothetical
protein R12C12.1a protein.
Length = 979
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 309 SVKILLKSGWLAKNTPYMSQISRSYQFAALN--TSQAESTGV 428
S IL GW+++ TPY ++IS+ + LN T AE TG+
Sbjct: 115 SRNILQNIGWISQYTPYQAEISQGRLESLLNFQTMIAEMTGL 156
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = -2
Query: 607 DAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSVRYNARIR--VKTYTD 434
D IP+ + L H F + M++P R EI+ + VRY + R K D
Sbjct: 19 DCRIPLHNELAYQHGIHFEAKY-VGSMEIPRPGTRIEIVAAMRRVRYEFKARGIKKRPVD 77
Query: 433 ELTPVDSACDVFKAANWYEREI-WDMYGVFFANHPDLR 323
VD V + E+ + WD + HP R
Sbjct: 78 ITVSVDGVKVVLQRKKQKEKGLSWDESKLLVMFHPIYR 115
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = -2
Query: 607 DAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSVRYNARIR--VKTYTD 434
D IP+ + L H F + M++P R EI+ + VRY + R K D
Sbjct: 19 DCRIPLHNELAYQHGIHFEAKY-VGSMEIPRPGTRIEIVAAMRRVRYEFKARGIKKRPVD 77
Query: 433 ELTPVDSACDVFKAANWYEREI-WDMYGVFFANHPDLR 323
VD V + E+ + WD + HP R
Sbjct: 78 ITVSVDGVKVVLQRKKQKEKGLSWDESKLLVMFHPIYR 115
>AF117337-1|AAD22029.1| 277|Caenorhabditis elegans Hus1-like
protein protein.
Length = 277
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 336 WLAKNTPYMSQISRSYQFAALNTSQAESTGVNSSV*VLTLIRAL 467
W + + PY SQI R + +N E + + + +L+R L
Sbjct: 54 WFSLSIPYSSQIFRKFDMVGMNPRNEEQNLIYFELEIDSLVRVL 97
>AF106587-2|AAC78225.1| 277|Caenorhabditis elegans Human hus1
related protein 1 protein.
Length = 277
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 336 WLAKNTPYMSQISRSYQFAALNTSQAESTGVNSSV*VLTLIRAL 467
W + + PY SQI R + +N E + + + +L+R L
Sbjct: 54 WFSLSIPYSSQIFRKFDMVGMNPRNEEQNLIYFELEIDSLVRVL 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,070,831
Number of Sequences: 27780
Number of extensions: 328714
Number of successful extensions: 626
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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