Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_K17
         (749 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              25   0.76 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   2.3  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   3.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   4.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.3  

>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -1

Query: 308 ETAIREFKEEALNSLSLTDKIQWEKEIDEFFSEGEVI-YQGYVDDCRNTDNSWIETIAYN 132
           ET+I + KE+          I  E E  + FSE  +  + GY DD  N +   I  IA  
Sbjct: 36  ETSIDQQKEDDFRD----GNIDVEDEKVQLFSECLIKKFNGY-DDGGNFNEVVIREIAEI 90

Query: 131 FHDESGLTVGLLKLHAGDDA 72
           F DE+G+   + +  A  DA
Sbjct: 91  FLDENGVNKLITECSAISDA 110


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = +3

Query: 615 FKVRIT-DFWICIWFSM*AWKC 677
           FKV I  D W  IW ++  W C
Sbjct: 128 FKVWIFGDLWCSIWLAVDVWMC 149


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 567 WTISNCQWFPFKPSGTY 517
           W I+N  ++P+ P GT+
Sbjct: 219 WRITNNLFYPYPPYGTF 235


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/34 (23%), Positives = 15/34 (44%)
 Frame = -1

Query: 668 GLHGKPYADPEIGDPNFEPLWNSIDGNISRVSYN 567
           G++     DP   +  FE +   +   I ++ YN
Sbjct: 151 GVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYN 184


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 481 PHRPKTPRPQI 513
           PH P+TP PQ+
Sbjct: 467 PHPPETPGPQV 477


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 17  CDLHPVLSQE*CQPNVLLQHH 79
           C++ P  S + CQ  ++ Q H
Sbjct: 374 CNISPRSSADSCQVGIMAQRH 394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,024
Number of Sequences: 438
Number of extensions: 5824
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)