Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_K13
         (680 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0475 + 23229046-23229480,23230062-23231205,23232187-232323...    30   2.0  
04_04_1022 + 30195703-30195753,30195925-30195987,30197535-301978...    29   2.6  

>02_04_0475 +
           23229046-23229480,23230062-23231205,23232187-23232334,
           23232776-23234225
          Length = 1058

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/29 (34%), Positives = 22/29 (75%)
 Frame = -2

Query: 451 VIGKNEEKEEIIPHLKKNTLSTIVLVNIY 365
           V+G+N+EKEEI+  L+ + +  ++++ I+
Sbjct: 208 VVGRNKEKEEILALLESDNIENLLVIPIF 236


>04_04_1022 +
           30195703-30195753,30195925-30195987,30197535-30197843,
           30197934-30199292
          Length = 593

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
 Frame = +3

Query: 378 NTIVDNVFFFKCGM-ISSFSSFFPIT-LCWVVG 470
           NTI+ ++ F+  GM + +FS+F P T LC VVG
Sbjct: 130 NTILVSLVFYLLGMMLVTFSAFLPTTALCTVVG 162


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,496,309
Number of Sequences: 37544
Number of extensions: 262042
Number of successful extensions: 445
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)