BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_K07
(542 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-1685|ABC66175.1| 94|Drosophila melanogaster CG33977-P... 60 3e-09
>AE014297-1685|ABC66175.1| 94|Drosophila melanogaster CG33977-PA
protein.
Length = 94
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = -3
Query: 318 MTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVILFR 139
MT L W+ S F + S++ G V+ PL + I L P+ L++FG+YSV +L+R
Sbjct: 1 MTNLQRWLFYASLFAIPYLSVVLGTVQTPLTTKYFLHIQLLPLLLLVIFGIYSVWTVLYR 60
Query: 138 VLTFNNC 118
LTFN+C
Sbjct: 61 TLTFNDC 67
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,843,683
Number of Sequences: 53049
Number of extensions: 336427
Number of successful extensions: 590
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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