Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_K01
         (723 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0695 - 31292622-31293317                                         30   2.1  
01_07_0293 - 42567564-42567751,42567905-42567994,42569028-425691...    29   4.9  
07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758     28   8.6  
03_06_0379 + 33505242-33505347,33505474-33505631,33506127-335061...    28   8.6  

>01_06_0695 - 31292622-31293317
          Length = 231

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 600 QQGPRSPSSSNPSLETKGSTSELTHRHSPLSFSP 701
           QQ P SPSSS  S  +  ++    H  +PL  SP
Sbjct: 13  QQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSP 46


>01_07_0293 -
           42567564-42567751,42567905-42567994,42569028-42569195,
           42569284-42569562,42569673-42569739
          Length = 263

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 552 DKGHNDT*FTFCLSEFQQGPRSPSSSNPSLETKGS 656
           D+G ND   T   S  QQ   SPSSS+  + T  S
Sbjct: 29  DRGENDETLTLARSLEQQAKVSPSSSSEKISTPSS 63


>07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758
          Length = 223

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3

Query: 606 GPRSPSSSNPSLETKGSTSELTHRHSPLSFSP 701
           GP SPSSS+PS  T    S L+   S  S +P
Sbjct: 44  GPSSPSSSSPSTPTAAGLSFLSSPGSSASPNP 75


>03_06_0379 +
           33505242-33505347,33505474-33505631,33506127-33506174,
           33506851-33506919
          Length = 126

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +2

Query: 356 LTQHCKYFINTNNKSFLRLHLKSLSNMI-KYFLTTTQLYS-EH*FNIK 493
           L+   ++F+N       RLH++++S+ + KY L    LY  +H  +IK
Sbjct: 5   LSAFSQWFVNPRRNPLARLHMQAISSRLRKYGLRYDDLYDPKHDLDIK 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,013,821
Number of Sequences: 37544
Number of extensions: 287724
Number of successful extensions: 525
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)