Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_J24
         (649 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036683-1|AAH36683.1|  142|Homo sapiens transmembrane protein 1...   169   6e-42
AK095420-1|BAC04545.1|  125|Homo sapiens protein ( Homo sapiens ...   169   6e-42
BC022550-1|AAH22550.1|   47|Homo sapiens C16orf69 protein protein.     49   2e-05

>BC036683-1|AAH36683.1|  142|Homo sapiens transmembrane protein 188
           protein.
          Length = 142

 Score =  169 bits (412), Expect = 6e-42
 Identities = 77/114 (67%), Positives = 91/114 (79%)
 Frame = -1

Query: 391 DLKAFERRLTEVIACLQPATMRWRILLTXVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 212
           DLKAFERRLTE I CLQPAT RWR+LL  VSVCTA  A++WL+DP T  VS   SLWNHP
Sbjct: 26  DLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHP 85

Query: 211 FFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRP 50
           FF ++   L+ LF  G+H++VVAPSII AR R++L ++NMSCDDTGKLILKPRP
Sbjct: 86  FFTISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTGKLILKPRP 139


>AK095420-1|BAC04545.1|  125|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38101 fis, clone D3OST1000270. ).
          Length = 125

 Score =  169 bits (412), Expect = 6e-42
 Identities = 77/114 (67%), Positives = 91/114 (79%)
 Frame = -1

Query: 391 DLKAFERRLTEVIACLQPATMRWRILLTXVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 212
           DLKAFERRLTE I CLQPAT RWR+LL  VSVCTA  A++WL+DP T  VS   SLWNHP
Sbjct: 9   DLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHP 68

Query: 211 FFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRP 50
           FF ++   L+ LF  G+H++VVAPSII AR R++L ++NMSCDDTGKLILKPRP
Sbjct: 69  FFTISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTGKLILKPRP 122


>BC022550-1|AAH22550.1|   47|Homo sapiens C16orf69 protein protein.
          Length = 47

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = -1

Query: 391 DLKAFERRLTEVIACLQPATMRWRILLTXV 302
           DLKAFERRLTE I CLQPAT RWR +L  +
Sbjct: 9   DLKAFERRLTEYIHCLQPATGRWRSVLLHI 38


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,640,076
Number of Sequences: 237096
Number of extensions: 1365987
Number of successful extensions: 6077
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6077
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)