Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_J22
         (440 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U59832-1|AAC50661.1|  465|Homo sapiens FREAC-4 protein.                31   2.3  
U59831-1|AAC50660.1|  465|Homo sapiens forkhead related activato...    31   2.3  
M36067-1|AAA59518.1|  919|Homo sapiens LIG1 protein.                   29   5.4  
BC110622-1|AAI10623.1|  801|Homo sapiens LIG1 protein protein.         29   5.4  
BC108318-1|AAI08319.1|  919|Homo sapiens ligase I, DNA, ATP-depe...    29   5.4  
AF527418-1|AAM77697.1|  919|Homo sapiens ligase I, DNA, ATP-depe...    29   5.4  
AB208791-1|BAD92028.1|  832|Homo sapiens DNA ligase I variant pr...    29   5.4  

>U59832-1|AAC50661.1|  465|Homo sapiens FREAC-4 protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = +2

Query: 209 SPPQPAPSRGGAASLAETAF 268
           SPP P P  G AA LA TAF
Sbjct: 308 SPPPPPPPHGAAAELARTAF 327


>U59831-1|AAC50660.1|  465|Homo sapiens forkhead related activator 4
           protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = +2

Query: 209 SPPQPAPSRGGAASLAETAF 268
           SPP P P  G AA LA TAF
Sbjct: 308 SPPPPPPPHGAAAELARTAF 327


>M36067-1|AAA59518.1|  919|Homo sapiens LIG1 protein.
          Length = 919

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 203 KVSPPQPAPSRGGAASLAETAFHKSTSSGV 292
           +VSPP+PA S    ASL++T+   S+ SG+
Sbjct: 89  QVSPPRPATSPENNASLSDTSPMDSSPSGI 118


>BC110622-1|AAI10623.1|  801|Homo sapiens LIG1 protein protein.
          Length = 801

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 203 KVSPPQPAPSRGGAASLAETAFHKSTSSGV 292
           +VSPP+PA S    ASL++T+   S+ SG+
Sbjct: 89  QVSPPRPATSPENNASLSDTSPMDSSPSGI 118


>BC108318-1|AAI08319.1|  919|Homo sapiens ligase I, DNA,
           ATP-dependent protein.
          Length = 919

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 203 KVSPPQPAPSRGGAASLAETAFHKSTSSGV 292
           +VSPP+PA S    ASL++T+   S+ SG+
Sbjct: 89  QVSPPRPATSPENNASLSDTSPMDSSPSGI 118


>AF527418-1|AAM77697.1|  919|Homo sapiens ligase I, DNA,
           ATP-dependent protein.
          Length = 919

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 203 KVSPPQPAPSRGGAASLAETAFHKSTSSGV 292
           +VSPP+PA S    ASL++T+   S+ SG+
Sbjct: 89  QVSPPRPATSPENNASLSDTSPMDSSPSGI 118


>AB208791-1|BAD92028.1|  832|Homo sapiens DNA ligase I variant
           protein.
          Length = 832

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 203 KVSPPQPAPSRGGAASLAETAFHKSTSSGV 292
           +VSPP+PA S    ASL++T+   S+ SG+
Sbjct: 121 QVSPPRPATSPENNASLSDTSPMDSSPSGI 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,569,341
Number of Sequences: 237096
Number of extensions: 866575
Number of successful extensions: 2020
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2019
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)