Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_J18
         (456 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   130   4e-31
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    60   8e-10
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    32   0.17 

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  130 bits (315), Expect = 4e-31
 Identities = 59/92 (64%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
 Frame = -2

Query: 329 PGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSD 150
           P L++YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD
Sbjct: 62  PSLIEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSD 121

Query: 149 SVESAKKEIGLWFTDKEVVGW-TPANENWVYE 57
           +V+SA +EI  WF  +E+  + +P   +WVYE
Sbjct: 122 AVDSANREIAHWFKQEEINDYASPFINSWVYE 153



 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 445 IIEXFEKKGFQLVGLKXVXPSEELFPATLQRFGIPPFLP 329
           II  FE++G++LV LK +  S+       Q     PF P
Sbjct: 24  IIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFP 62


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 60.1 bits (139), Expect = 8e-10
 Identities = 34/75 (45%), Positives = 44/75 (58%)
 Frame = -2

Query: 329 PGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSD 150
           P L+ YMSSGPVV M+WEG +VVK  R +LG       +  +I  DL ++      H SD
Sbjct: 37  PLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGCHCSD 95

Query: 149 SVESAKKEIGLWFTD 105
           SV SA +E  LWF +
Sbjct: 96  SVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 32.3 bits (70), Expect = 0.17
 Identities = 24/70 (34%), Positives = 35/70 (50%)
 Frame = -2

Query: 323 LVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSV 144
           LV+++SSGPV+ M   G      G   L        QP  IR    +   RN+ H SD  
Sbjct: 70  LVRHISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAHASDE- 126

Query: 143 ESAKKEIGLW 114
           ++A+KE+ L+
Sbjct: 127 DAAEKELQLF 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,697,562
Number of Sequences: 27780
Number of extensions: 214981
Number of successful extensions: 647
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)