Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_J11
         (928 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533548-1|CAG38579.1|  379|Homo sapiens LYAR protein.                 55   4e-07
BC015796-1|AAH15796.1|  379|Homo sapiens hypothetical protein FL...    55   4e-07
AK000432-1|BAA91162.1|  379|Homo sapiens protein ( Homo sapiens ...    55   4e-07
AF229835-1|AAF42870.1|  110|Homo sapiens apoptosis-related prote...    55   4e-07

>CR533548-1|CAG38579.1|  379|Homo sapiens LYAR protein.
          Length = 379

 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = -3

Query: 329 EEVNAENNGKFNWHAVIMSVL-QKKDNEVPFKRLQKKVLAEYSEATGQ--EIDDRIADKF 159
           E+  A   GKFNW   I ++L Q  DNE+  K+L+KKVLA+Y   T +    ++ +   F
Sbjct: 299 EDDEAPAKGKFNWKGTIKAILKQAPDNEITIKKLRKKVLAQYYTVTDEHHRSEEELLVIF 358

Query: 158 IKKLKSAPNVRVDKNRVLLIE 96
            KK+   P  ++ K++V L++
Sbjct: 359 NKKISKNPTFKLLKDKVKLVK 379


>BC015796-1|AAH15796.1|  379|Homo sapiens hypothetical protein
           FLJ20425 protein.
          Length = 379

 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = -3

Query: 329 EEVNAENNGKFNWHAVIMSVL-QKKDNEVPFKRLQKKVLAEYSEATGQ--EIDDRIADKF 159
           E+  A   GKFNW   I ++L Q  DNE+  K+L+KKVLA+Y   T +    ++ +   F
Sbjct: 299 EDDEAPAKGKFNWKGTIKAILKQAPDNEITIKKLRKKVLAQYYTVTDEHHRSEEELLVIF 358

Query: 158 IKKLKSAPNVRVDKNRVLLIE 96
            KK+   P  ++ K++V L++
Sbjct: 359 NKKISKNPTFKLLKDKVKLVK 379


>AK000432-1|BAA91162.1|  379|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20425 fis, clone KAT02707. ).
          Length = 379

 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = -3

Query: 329 EEVNAENNGKFNWHAVIMSVL-QKKDNEVPFKRLQKKVLAEYSEATGQ--EIDDRIADKF 159
           E+  A   GKFNW   I ++L Q  DNE+  K+L+KKVLA+Y   T +    ++ +   F
Sbjct: 299 EDDEAPAKGKFNWKGTIKAILKQAPDNEITIKKLRKKVLAQYYTVTDEHHRSEEELLVIF 358

Query: 158 IKKLKSAPNVRVDKNRVLLIE 96
            KK+   P  ++ K++V L++
Sbjct: 359 NKKISKNPTFKLLKDKVKLVK 379


>AF229835-1|AAF42870.1|  110|Homo sapiens apoptosis-related protein
           PNAS-5 protein.
          Length = 110

 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = -3

Query: 329 EEVNAENNGKFNWHAVIMSVL-QKKDNEVPFKRLQKKVLAEYSEATGQ--EIDDRIADKF 159
           E+  A   GKFNW   I ++L Q  DNE+  K+L+KKVLA+Y   T +    ++ +   F
Sbjct: 30  EDDEAPAKGKFNWKGTIKAILKQAPDNEITIKKLRKKVLAQYYTVTDEHHRSEEELLVIF 89

Query: 158 IKKLKSAPNVRVDKNRVLLIE 96
            KK+   P  ++ K++V L++
Sbjct: 90  NKKISKNPTFKLLKDKVKLVK 110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,967,283
Number of Sequences: 237096
Number of extensions: 1353566
Number of successful extensions: 2931
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2926
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)