Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_J11
         (928 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.9  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   5.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   6.9  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
          isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 62 NFTISKDLFPMCXFLW 15
          N  IS D+ P+C  LW
Sbjct: 44 NTLISNDILPVCNGLW 59


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 62  NFTISKDLFPMCXFLW 15
           N  IS D+ P+C  LW
Sbjct: 82  NTLISNDILPVCNGLW 97


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
 Frame = -3

Query: 881 QNVNKGNITNGEANKXXG-XQNXXXGXQNK 795
           QN N  N  N  ANK  G  QN      NK
Sbjct: 440 QNANNQNADNQNANKQNGNRQNDNRQNDNK 469


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 688 PKNNAKKRRSVRSMKQNCI 632
           P + +KK   VRS +Q+CI
Sbjct: 277 PSSTSKKSGIVRSHQQSCI 295


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,871
Number of Sequences: 438
Number of extensions: 2702
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)