Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_J10
         (328 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U25801-1|AAB03813.1|  167|Homo sapiens Tax1 binding protein prot...    28   5.8  

>U25801-1|AAB03813.1|  167|Homo sapiens Tax1 binding protein
           protein.
          Length = 167

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = +1

Query: 61  IKCNKNMVMRMSMRSMQPENMQSTQSTPGVRCTQQRPEQYMQQLQGTCSSPAEAWLTRKP 240
           IK   N+  +  M+ + PE+ +  +  PG R  +  P+  + + +GT S   EA   R  
Sbjct: 74  IKEVANVCNQSLMKLVTPEDDELDELRPGQRQAEPTPDDALPKQEGTASGCTEAHDFRDI 133

Query: 241 GEQRRSSI 264
               R+S+
Sbjct: 134 PPMMRNSL 141


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,140,387
Number of Sequences: 237096
Number of extensions: 374440
Number of successful extensions: 1542
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1542
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)