Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_J02
         (551 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024808-5|AAK29931.1|  789|Caenorhabditis elegans Hypothetical ...    31   0.73 
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z81512-1|CAB04173.1|  601|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>AC024808-5|AAK29931.1|  789|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.8 protein.
          Length = 789

 Score = 30.7 bits (66), Expect = 0.73
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -2

Query: 292 LHSLMAESSVDYVAKFADLAAEVNALAPGLDGRDAPRPA 176
           L  L+ +S V   A +A+   E  AL  GL+  D PRPA
Sbjct: 414 LQGLLQKSGVHIRADYAERLHEFQALMDGLEIEDKPRPA 452


>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
            T08G11.1b protein.
          Length = 3185

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 316  PELAVDSQLHSLMAE-SSVDYVAKFADLAAEVNALAPGLDGRDAPRP 179
            PE+ VD+ +HS+ AE S  DY      L+     LA G D    P P
Sbjct: 1304 PEIVVDAHIHSIEAEMSDADYKTLMQTLSGN---LAEGADLAIPPPP 1347


>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
            T08G11.1a protein.
          Length = 3212

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 316  PELAVDSQLHSLMAE-SSVDYVAKFADLAAEVNALAPGLDGRDAPRP 179
            PE+ VD+ +HS+ AE S  DY      L+     LA G D    P P
Sbjct: 1304 PEIVVDAHIHSIEAEMSDADYKTLMQTLSGN---LAEGADLAIPPPP 1347


>Z81512-1|CAB04173.1|  601|Caenorhabditis elegans Hypothetical
           protein F25C8.1 protein.
          Length = 601

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 418 SPSRLLREAEGWLEG-SVHDFSLSSFLGHLDGNRPPEL 308
           S S +  +A   ++G ++H+F L S LG  DGN  P L
Sbjct: 531 SLSTIRPDAVSIVDGFAIHEFELKSVLGRRDGNVYPGL 568


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,004,073
Number of Sequences: 27780
Number of extensions: 133732
Number of successful extensions: 442
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)