Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_I23
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.63 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.84 

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 328 FNIV*FSCSQFISTEKPNYKSTHKRNTRKILRLNILIV 441
           FN+V  S  ++I+  +P   + HK N R  + L IL+V
Sbjct: 275 FNLVAISIDRYIAVTQPIKYAKHKNNRR--VWLTILLV 310


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +2

Query: 524 MNLLKYI*DDFNINQVVYQMI---INRYLVLLKCXQLQN 631
           M L K+I +D+N N+V ++++   +N  ++  +C    N
Sbjct: 550 MKLQKFINNDYNFNEVNFRILGANVNDLIMNTRCANSDN 588


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,817
Number of Sequences: 438
Number of extensions: 2876
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)