Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_I22
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical pr...   152   2e-37
U97002-9|AAB52261.2|  985|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U13019-11|AAC24449.1|  445|Caenorhabditis elegans Hypothetical p...    28   6.1  
AC006672-6|AAK84541.2|  341|Caenorhabditis elegans Hypothetical ...    28   6.1  
Z71266-9|CAD24483.1|  489|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AB040992-1|BAB21560.1|  489|Caenorhabditis elegans CeCRMP/DHP-1 ...    27   8.1  

>Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical
           protein F59B2.3 protein.
          Length = 418

 Score =  152 bits (369), Expect = 2e-37
 Identities = 78/172 (45%), Positives = 112/172 (65%), Gaps = 3/172 (1%)
 Frame = -3

Query: 613 AMLPFHHRDPGLVGLLAS---TMKKQVYYGIIADGIHTHPAALRIANRTNPEGLVLVSDA 443
           AM  +HHRDPGL+GLL S   T    +YYGII+DGIHTH +ALRIA  TN  GLVLV+DA
Sbjct: 248 AMQSYHHRDPGLIGLLTSSKLTPDHPLYYGIISDGIHTHDSALRIAYHTNSAGLVLVTDA 307

Query: 442 VPAQGLPDGNHRIGPQIVTVEDGCAYVTGTKTLCGSTTALDSCIVKFKDSIECSLEYALE 263
           + A G+ DG H++G Q + V+   A + GT T  GS  ++  CI     +  C +E+AL+
Sbjct: 308 IAALGMSDGVHKLGTQTIHVKGLEAKLDGTNTTAGSVASMPYCIRHLMKATGCPIEFALQ 367

Query: 262 AASLHPAKALGIDDKKGNLNFDSDADFVILHPKTLKVQSTWIAGECVYKCQN 107
           +A+  PA  LG+ D+KG L+    ADFV++  K + V++T+ +G+ V+  Q+
Sbjct: 368 SATHKPATLLGVSDEKGTLDVGRLADFVLI-DKNVTVKATFCSGKRVFLAQD 418


>U97002-9|AAB52261.2|  985|Caenorhabditis elegans Hypothetical
           protein K09H11.1 protein.
          Length = 985

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 325 LDSCIVKFKDSIECSLEYALEAASLHPAKALGIDDKKGNL 206
           L+SC +  +       E ALE + LHP+  + +DD   NL
Sbjct: 144 LESCRLGLRKPDTKIYELALERSKLHPSDCVFLDDLGSNL 183


>U13019-11|AAC24449.1|  445|Caenorhabditis elegans Hypothetical
           protein T12A2.1 protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -3

Query: 295 SIECSLEYALEAASLHPAKALGIDDKKGNLNFDSDADFVIL 173
           +++ S+  AL AA+L+ A ++G     G +    +ADFVIL
Sbjct: 374 TMKLSMPEALTAATLNSAHSIGRGKSHGAIAKGRNADFVIL 414


>AC006672-6|AAK84541.2|  341|Caenorhabditis elegans Hypothetical
           protein K08D12.2 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 19/75 (25%), Positives = 30/75 (40%)
 Frame = -3

Query: 454 VSDAVPAQGLPDGNHRIGPQIVTVEDGCAYVTGTKTLCGSTTALDSCIVKFKDSIECSLE 275
           V D  PA     GN R+ P++V + DG   +   K +    +  D  I +F D+ +    
Sbjct: 184 VHDFTPAGVNGKGNFRVTPEVVQISDGQEEILRAKGVILKPSPAD-FIPRFTDTTDPDPT 242

Query: 274 YALEAASLHPAKALG 230
           +        P   LG
Sbjct: 243 FLYVLGKSEPVDELG 257


>Z71266-9|CAD24483.1|  489|Caenorhabditis elegans Hypothetical
           protein R06C7.3 protein.
          Length = 489

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
 Frame = -3

Query: 391 VTVEDGCAYVTGTKTLC-GSTTALDSCIVKFKDSIECSLEYALEAASLHP---------- 245
           +T  D C Y    K+L  G+ T + + I   +D +    E  + +  + P          
Sbjct: 319 LTGTDNCTYDCRQKSLGKGNFTKIPNGINGVEDRMSVVWEKGVHSGIIDPMRYVSITSST 378

Query: 244 -AKALGIDDKKGNLNFDSDADFVILHPKTLKVQS 146
            AK   I  +KG +   SDAD VI +P   +  S
Sbjct: 379 AAKIFNIYPRKGRIAVGSDADIVIFNPNATRTIS 412


>AB040992-1|BAB21560.1|  489|Caenorhabditis elegans CeCRMP/DHP-1
           protein.
          Length = 489

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
 Frame = -3

Query: 391 VTVEDGCAYVTGTKTLC-GSTTALDSCIVKFKDSIECSLEYALEAASLHP---------- 245
           +T  D C Y    K+L  G+ T + + I   +D +    E  + +  + P          
Sbjct: 319 LTGTDNCTYDCRQKSLGKGNFTKIPNGINGVEDRMSVVWEKGVHSGIIDPMRYVSITSST 378

Query: 244 -AKALGIDDKKGNLNFDSDADFVILHPKTLKVQS 146
            AK   I  +KG +   SDAD VI +P   +  S
Sbjct: 379 AAKIFNIYPRKGRIAVGSDADIVIFNPNATRTIS 412


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,141,888
Number of Sequences: 27780
Number of extensions: 258345
Number of successful extensions: 653
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)