Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_I20
         (554 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353...    29   1.9  
04_01_0419 + 5555264-5555808,5556582-5556903,5557011-5557271           29   3.3  
05_04_0423 - 21126038-21126556                                         27   7.6  
04_01_0114 + 1196580-1196585,1196972-1197063,1197761-1197858,119...    27   7.6  

>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
            3536083-3536226,3536974-3537375,3537499-3537721,
            3537830-3542368,3542480-3542599,3543005-3543038,
            3543922-3544102,3544198-3544815,3545022-3551098,
            3551139-3551304,3551508-3551614,3552056-3552178,
            3553417-3553642
          Length = 5100

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +1

Query: 322  LHGRNRQGGGTYP-CGLTRGPTSSKNIQDTFISTCQNR---CSEYTAFSYDIVQSMTLPA 489
            LH +N       P C + R P+S      TF++ C       S++      +V +  L  
Sbjct: 3628 LHQKNSNDTDALPACSIPRSPSSCYGCSTTFVTQCLELLQVLSKHATSRKQLVSAGILSE 3687

Query: 490  KFQNSVYQ 513
             F+N+++Q
Sbjct: 3688 LFENNIHQ 3695


>04_01_0419 + 5555264-5555808,5556582-5556903,5557011-5557271
          Length = 375

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 350 PPPCLFLP*SCNDFWFEGWSSRCNYTETL-ELISQGAG 240
           PPP   LP  C D  FE      N   TL EL+S+G G
Sbjct: 171 PPPAADLPEICRDALFEYAKQVKNLGNTLFELLSEGLG 208


>05_04_0423 - 21126038-21126556
          Length = 172

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 202 WLLEPIDIYNVNAPAPWDISSK 267
           W   P DIY +N+ A +D+S+K
Sbjct: 121 WEQPPADIYKMNSDASFDVSTK 142


>04_01_0114 +
           1196580-1196585,1196972-1197063,1197761-1197858,
           1198202-1198357,1202816-1203429,1203541-1203611,
           1203707-1203952,1204359-1204485,1204993-1205185,
           1205553-1206109
          Length = 719

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 138 PS*FFNFFYCLGGRAQPTWCLMVTGA 215
           PS +F FF C+GG      C  V G+
Sbjct: 582 PSDYFKFFNCMGGLGSADNCTTVKGS 607


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,321,166
Number of Sequences: 37544
Number of extensions: 309533
Number of successful extensions: 548
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)