Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_I16
         (763 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC024162-1|AAH24162.1|  612|Homo sapiens integrin alpha FG-GAP r...   130   7e-30
BC006321-1|AAH06321.2|  612|Homo sapiens integrin alpha FG-GAP r...   130   7e-30
AK027596-1|BAB55220.1|  612|Homo sapiens protein ( Homo sapiens ...   130   7e-30
AF503339-1|AAN31655.1|  612|Homo sapiens T-cell immunomodulatory...   130   7e-30
AF212247-1|AAG41782.1|  609|Homo sapiens CDA08 protein.               130   7e-30
BC125153-1|AAI25154.1|  387|Homo sapiens DPF1 protein protein.         31   5.9  
BC021191-1|AAH21191.1|  414|Homo sapiens DPF1 protein protein.         31   5.9  

>BC024162-1|AAH24162.1|  612|Homo sapiens integrin alpha FG-GAP
           repeat containing 1 protein.
          Length = 612

 Score =  130 bits (313), Expect = 7e-30
 Identities = 74/172 (43%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
 Frame = -3

Query: 749 DTNFIKVIVVTGLTNAIVPILXTTLYKRKAT-FGTNLPGPKIGYNTWSQEGTYRTGVCAQ 573
           D  F+KVIV++GL +   P        RK T FG N PGP I Y T    G  + G   Q
Sbjct: 436 DAYFVKVIVLSGLCSNDCP--------RKITPFGVNQPGPYIMYTTVDANGYLKNGSAGQ 487

Query: 572 LPQSAYFALQLPYSIFGLDRTPNFVDTLNVGL---SGYS----KSWTQIIPNSQIVVIPV 414
           L QSA+ ALQLPY++ GL R+ NF+D L VG+   SG      + WT IIPNSQ++VIP 
Sbjct: 488 LSQSAHLALQLPYNVLGLGRSANFLDHLYVGIPRPSGEKSIRKQEWTAIIPNSQLIVIPY 547

Query: 413 PPYDPSQWKAQLFVTPSKVILKSVFVLTAIIVIITGCVLYLHWKER--NDRQ 264
           P   P  W A+L++TPS ++L +   L  + V I   +  LHW+E+  +DR+
Sbjct: 548 PHNVPRSWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQEKKADDRE 599


>BC006321-1|AAH06321.2|  612|Homo sapiens integrin alpha FG-GAP
           repeat containing 1 protein.
          Length = 612

 Score =  130 bits (313), Expect = 7e-30
 Identities = 74/172 (43%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
 Frame = -3

Query: 749 DTNFIKVIVVTGLTNAIVPILXTTLYKRKAT-FGTNLPGPKIGYNTWSQEGTYRTGVCAQ 573
           D  F+KVIV++GL +   P        RK T FG N PGP I Y T    G  + G   Q
Sbjct: 436 DAYFVKVIVLSGLCSNDCP--------RKITPFGVNQPGPYIMYTTVDANGYLKNGSAGQ 487

Query: 572 LPQSAYFALQLPYSIFGLDRTPNFVDTLNVGL---SGYS----KSWTQIIPNSQIVVIPV 414
           L QSA+ ALQLPY++ GL R+ NF+D L VG+   SG      + WT IIPNSQ++VIP 
Sbjct: 488 LSQSAHLALQLPYNVLGLGRSANFLDHLYVGIPRPSGEKSIRKQEWTAIIPNSQLIVIPY 547

Query: 413 PPYDPSQWKAQLFVTPSKVILKSVFVLTAIIVIITGCVLYLHWKER--NDRQ 264
           P   P  W A+L++TPS ++L +   L  + V I   +  LHW+E+  +DR+
Sbjct: 548 PHNVPRSWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQEKKADDRE 599


>AK027596-1|BAB55220.1|  612|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14690 fis, clone NT2RP2005270. ).
          Length = 612

 Score =  130 bits (313), Expect = 7e-30
 Identities = 74/172 (43%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
 Frame = -3

Query: 749 DTNFIKVIVVTGLTNAIVPILXTTLYKRKAT-FGTNLPGPKIGYNTWSQEGTYRTGVCAQ 573
           D  F+KVIV++GL +   P        RK T FG N PGP I Y T    G  + G   Q
Sbjct: 436 DAYFVKVIVLSGLCSNDCP--------RKITPFGVNQPGPYIMYTTVDANGYLKNGSAGQ 487

Query: 572 LPQSAYFALQLPYSIFGLDRTPNFVDTLNVGL---SGYS----KSWTQIIPNSQIVVIPV 414
           L QSA+ ALQLPY++ GL R+ NF+D L VG+   SG      + WT IIPNSQ++VIP 
Sbjct: 488 LSQSAHLALQLPYNVLGLGRSANFLDHLYVGIPRPSGEKSIRKQEWTAIIPNSQLIVIPY 547

Query: 413 PPYDPSQWKAQLFVTPSKVILKSVFVLTAIIVIITGCVLYLHWKER--NDRQ 264
           P   P  W A+L++TPS ++L +   L  + V I   +  LHW+E+  +DR+
Sbjct: 548 PHNVPRSWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQEKKADDRE 599


>AF503339-1|AAN31655.1|  612|Homo sapiens T-cell immunomodulatory
           protein protein.
          Length = 612

 Score =  130 bits (313), Expect = 7e-30
 Identities = 74/172 (43%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
 Frame = -3

Query: 749 DTNFIKVIVVTGLTNAIVPILXTTLYKRKAT-FGTNLPGPKIGYNTWSQEGTYRTGVCAQ 573
           D  F+KVIV++GL +   P        RK T FG N PGP I Y T    G  + G   Q
Sbjct: 436 DAYFVKVIVLSGLCSNDCP--------RKITPFGVNQPGPYIMYTTVDANGYLKNGSAGQ 487

Query: 572 LPQSAYFALQLPYSIFGLDRTPNFVDTLNVGL---SGYS----KSWTQIIPNSQIVVIPV 414
           L QSA+ ALQLPY++ GL R+ NF+D L VG+   SG      + WT IIPNSQ++VIP 
Sbjct: 488 LSQSAHLALQLPYNVLGLGRSANFLDHLYVGIPRPSGEKSIRKQEWTAIIPNSQLIVIPY 547

Query: 413 PPYDPSQWKAQLFVTPSKVILKSVFVLTAIIVIITGCVLYLHWKER--NDRQ 264
           P   P  W A+L++TPS ++L +   L  + V I   +  LHW+E+  +DR+
Sbjct: 548 PHNVPRSWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQEKKADDRE 599


>AF212247-1|AAG41782.1|  609|Homo sapiens CDA08 protein.
          Length = 609

 Score =  130 bits (313), Expect = 7e-30
 Identities = 74/172 (43%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
 Frame = -3

Query: 749 DTNFIKVIVVTGLTNAIVPILXTTLYKRKAT-FGTNLPGPKIGYNTWSQEGTYRTGVCAQ 573
           D  F+KVIV++GL +   P        RK T FG N PGP I Y T    G  + G   Q
Sbjct: 433 DAYFVKVIVLSGLCSNDCP--------RKITPFGVNQPGPYIMYTTVDANGYLKNGSAGQ 484

Query: 572 LPQSAYFALQLPYSIFGLDRTPNFVDTLNVGL---SGYS----KSWTQIIPNSQIVVIPV 414
           L QSA+ ALQLPY++ GL R+ NF+D L VG+   SG      + WT IIPNSQ++VIP 
Sbjct: 485 LSQSAHLALQLPYNVLGLGRSANFLDHLYVGIPRPSGEKSIRKQEWTAIIPNSQLIVIPY 544

Query: 413 PPYDPSQWKAQLFVTPSKVILKSVFVLTAIIVIITGCVLYLHWKER--NDRQ 264
           P   P  W A+L++TPS ++L +   L  + V I   +  LHW+E+  +DR+
Sbjct: 545 PHNVPRSWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQEKKADDRE 596


>BC125153-1|AAI25154.1|  387|Homo sapiens DPF1 protein protein.
          Length = 387

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 399 ISMESTTICYT*QSDSQKCFCTNCNYSYH 313
           I  +S ++C T ++D Q  FC +C+  YH
Sbjct: 323 IECKSCSLCGTSENDDQLLFCDDCDRGYH 351


>BC021191-1|AAH21191.1|  414|Homo sapiens DPF1 protein protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 399 ISMESTTICYT*QSDSQKCFCTNCNYSYH 313
           I  +S ++C T ++D Q  FC +C+  YH
Sbjct: 350 IECKSCSLCGTSENDDQLLFCDDCDRGYH 378


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,169,023
Number of Sequences: 237096
Number of extensions: 2464076
Number of successful extensions: 3912
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3902
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)