Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_I15
         (783 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.79 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   3.2  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   4.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   7.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   7.4  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   9.8  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = -1

Query: 597 CRTCAPGSWAGS---ASRPLVXXXXXXXXXXRYTVQPQISPVK 478
           C      SW GS   ++R LV            +VQPQ +PVK
Sbjct: 364 CNATGAFSWIGSDGWSARGLVSDGNEAEVEGTLSVQPQANPVK 406


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 546 PEGVRPSPPTSPEHMSDMMSPYKLGI 623
           P+    + PTSP H+SD  +   +G+
Sbjct: 251 PKPQTKTKPTSPYHVSDHKAAITVGV 276


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
 Frame = +2

Query: 560 AEPAHE---PGAHVRHDVPIQVGHHQH 631
           A P H+   P AH  +   IQ+GH  H
Sbjct: 438 ATPHHQHSTPLAHSSYPAAIQIGHTPH 464


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 7/27 (25%)
 Frame = -1

Query: 630 CW*CPTCMGT-------SCRTCAPGSW 571
           CW C  C          +C  C PG W
Sbjct: 467 CWVCDQCEEYEYVHDEYTCMDCGPGKW 493


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 7/27 (25%)
 Frame = -1

Query: 630 CW*CPTCMGT-------SCRTCAPGSW 571
           CW C  C          +C  C PG W
Sbjct: 557 CWVCDQCEEYEYVYDEYTCMDCGPGKW 583


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
          protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 36 KYEW*WFDYS 65
          KY+W +FDY+
Sbjct: 35 KYQWKYFDYN 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,058
Number of Sequences: 438
Number of extensions: 4898
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)