Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_I13
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical pr... 67 1e-11
L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical ... 31 0.79
Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical pr... 30 1.4
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane... 30 1.4
Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical p... 29 2.4
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 2.4
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 28 5.6
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 28 5.6
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 28 5.6
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 28 5.6
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z50755-4|CAA90634.1| 369|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z47067-2|CAA87329.1| 498|Caenorhabditis elegans Hypothetical pr... 28 7.4
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 7.4
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 7.4
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 7.4
U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defecti... 28 7.4
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 28 7.4
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 28 7.4
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 27 9.8
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 27 9.8
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 27 9.8
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 27 9.8
>L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical
protein F42H10.7a protein.
Length = 529
Score = 67.3 bits (157), Expect = 1e-11
Identities = 56/167 (33%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Frame = -1
Query: 589 YPILQTPSPRPGEGASPLMTWGHIEGTPFRLDGGD-TPLPAAGAGVAYKMLEGGARERIA 413
+ +L+TP+P P + SPLMTWG I+GTPFRLD D T GA +K+ E RE+IA
Sbjct: 326 FKLLETPNPNPDDMDSPLMTWGEIDGTPFRLDAPDVTEHSLPGAAPVFKIPEVPYREKIA 385
Query: 412 LQLAEQLAK--------XXXXXXXXXXXXXXXXXXXXXRLASMSPAARKLAAKHLLTPRL 257
+ + +A +LA +SPAA+KLA K L L
Sbjct: 386 QSMNDSIAAKYRDKRKVAMRAAEGAHRTPGFGSKRVSDKLAQLSPAAQKLATKKL---GL 442
Query: 256 KLTPNDMGILSHAATPK-RTPTRRPLVATPSTNKNTATSTRPSDSGN 119
K+ P S A+PK + RP + ST +A S + G+
Sbjct: 443 KMLPAHK---SPFASPKIMSNWSRPSSSKRSTTPGSAWSRGSTTPGS 486
>L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical
protein F42H10.7b protein.
Length = 531
Score = 65.7 bits (153), Expect = 3e-11
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Frame = -1
Query: 589 YPILQTPSPRPGEGASPLMTWGHIEGTPFRLDGGD-TPLPAAGAGVAYKMLEGGARERIA 413
+ +L+TP+P P + SPLMTWG I+GTPFRLD D T GA +K+ E RE+IA
Sbjct: 326 FKLLETPNPNPDDMDSPLMTWGEIDGTPFRLDAPDVTEHSLPGAAPVFKIPEVPYREKIA 385
Query: 412 LQLAE----------QLAKXXXXXXXXXXXXXXXXXXXXXRLASMSPAARKLAAKHLLTP 263
+ + ++A +LA +SPAA+KLA K L
Sbjct: 386 QSMNDSIAAKYRDKRKVAMRAAEGAHFSRTPGFGSKRVSDKLAQLSPAAQKLATKKL--- 442
Query: 262 RLKLTPNDMGILSHAATPK-RTPTRRPLVATPSTNKNTATSTRPSDSGN 119
LK+ P S A+PK + RP + ST +A S + G+
Sbjct: 443 GLKMLPAHK---SPFASPKIMSNWSRPSSSKRSTTPGSAWSRGSTTPGS 488
>AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical
protein B0348.5 protein.
Length = 254
Score = 31.1 bits (67), Expect = 0.79
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -1
Query: 205 RTPTRRPLVATPSTNKNTATSTRPSDSGNVNNSS 104
R PT++ + A PS++ NT+T+ +P+ + + S
Sbjct: 220 RKPTKKTVAAAPSSSSNTSTTAKPAKTVKTSEKS 253
>Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical
protein T24C2.1 protein.
Length = 711
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 220 AATPKRTPTRRPLVATPSTNKNTATSTRPSDSGNVNNS 107
A+T K TPT A P ++ T ST+P+ NV +S
Sbjct: 541 ASTKKLTPTTPYASAPPESSTQTPNSTKPTSIRNVTHS 578
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 220 AATPKRTPTRRPLVATPSTNKNTATSTRPSDSGNVNNSSTMIENNL 83
AA+ KR PT AT K+T + +PS+ ++ + + EN+L
Sbjct: 389 AASTKRPPTTEKPTATTEEVKSTTAAAKPSERPTGHDETPVEENSL 434
>AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane
protein RAM-5 protein.
Length = 711
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 220 AATPKRTPTRRPLVATPSTNKNTATSTRPSDSGNVNNS 107
A+T K TPT A P ++ T ST+P+ NV +S
Sbjct: 541 ASTKKLTPTTPYASAPPESSTQTPNSTKPTSIRNVTHS 578
>Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical
protein Y57G11C.51 protein.
Length = 160
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = -1
Query: 220 AATPKRTP--TRRPLVATPSTNKNTATSTRPSDS 125
+A PKR+P + +P +TPS++ +++TS+ PS S
Sbjct: 109 SANPKRSPRWSPQPDPSTPSSSTSSSTSSSPSSS 142
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -1
Query: 268 TPRLKLTPNDMGILSHAATPKRTPTRRPLVATPSTNKNTATSTRPSDSGNVNNSSTMIEN 89
T KLT + P T T+ P+V T +T + +T PS + + S+T+ +
Sbjct: 387 TSTKKLTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKPTTSPSTTTSTTTSTTIPPS 446
Query: 88 NLT 80
T
Sbjct: 447 TTT 449
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -1
Query: 295 RKLAAKHLLTPRLKLTPNDMGILSHAAT-PKRTPTRRPLVATPSTNKNTATSTRPSDS 125
R A+++L+ + + + +S A P TPT T +T K T TST PS S
Sbjct: 1123 RGTASQNLIGSMIAYRESTIDTVSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPSTS 1180
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -1
Query: 289 LAAKHLLTPRLKLTPNDMGILSHAATPKRTPTRRPLVATPSTNKNTATSTRPSD 128
+AAK TP K + S A K TP ++P TP+ K ++S SD
Sbjct: 102 VAAKKSATPVQKKAESSSSSDSDAPAKKLTPVKKP-AQTPAQKKAASSSDSDSD 154
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -1
Query: 289 LAAKHLLTPRLKLTPNDMGILSHAATPKRTPTRRPLVATPSTNKNTATSTRPSD 128
+AAK TP K + S A K TP ++P TP+ K ++S SD
Sbjct: 102 VAAKKSATPVQKKAESSSSSDSDAPAKKLTPVKKP-AQTPAQKKAASSSDSDSD 154
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -3
Query: 338 SNEHRAPGQHVAGGQEISRETFTNTETQADAKRHGNFIARGNTETNTNTA 189
S E P + G I F N + DA+ NF RG T + NTA
Sbjct: 865 SQERSCPMEQTCYGNGIGTGRFNNAASMQDARERQNF--RGRTGSFYNTA 912
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -3
Query: 338 SNEHRAPGQHVAGGQEISRETFTNTETQADAKRHGNFIARGNTETNTNTA 189
S E P + G I F N + DA+ NF RG T + NTA
Sbjct: 865 SQERSCPMEQTCYGNGIGTGRFNNAASMQDARERQNF--RGRTGSFYNTA 912
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 146 CCRVLIRARCCH*RSPCWCSFRC 214
CCR RCC PC C C
Sbjct: 103 CCRTCCCTRCCTCCRPCCCGCGC 125
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 146 CCRVLIRARCCH*RSPCWCSFRC 214
CCR RCC PC C C
Sbjct: 85 CCRTCCCTRCCTCCRPCCCGCGC 107
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 146 CCRVLIRARCCH*RSPCWCSFRC 214
CCR RCC PC C C
Sbjct: 101 CCRTCCCTRCCTCCRPCCCGCGC 123
>Z50755-4|CAA90634.1| 369|Caenorhabditis elegans Hypothetical
protein R12H7.4 protein.
Length = 369
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 157 NTATSTRPSDSGNVNNSSTMIE-NNLTDNLLQ 65
N +ST +D+ + ++T E N+TDNLLQ
Sbjct: 3 NNNSSTNSTDTNSTTTTTTTAEPTNITDNLLQ 34
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 146 CCRVLIRARCCH*RSPCWCSFRC 214
CCR RCC PC C C
Sbjct: 87 CCRTCCCTRCCTCCRPCCCGCGC 109
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 146 CCRVLIRARCCH*RSPCWCSFRC 214
CCR RCC PC C C
Sbjct: 90 CCRTCCCTRCCTCCRPCCCGCGC 112
>Z47067-2|CAA87329.1| 498|Caenorhabditis elegans Hypothetical
protein C43C3.2 protein.
Length = 498
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -1
Query: 265 PRLKLTPNDMG--ILSHAATPKRTPTRRPLVATPSTNKNTATSTRPSDSGNVNNSSTM-I 95
P K T N +G +SHA T P L+A PS++ + N NN+ ++ +
Sbjct: 397 PERKYTRNGVGGRQMSHALTTNTRPEYSELIAIPSSSCRPDSRVSAMIHNNNNNTESLPL 456
Query: 94 ENNLTDNLLQD 62
N+++ +D
Sbjct: 457 AQNISNMTNKD 467
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 146 CCRVLIRARCCH*RSPCWCSFRC 214
CCR RCC PC C C
Sbjct: 102 CCRTCCCTRCCTCCRPCCCGCGC 124
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 146 CCRVLIRARCCH*RSPCWCSFRC 214
CCR RCC PC C C
Sbjct: 102 CCRTCCCTRCCTCCRPCCCGCGC 124
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 146 CCRVLIRARCCH*RSPCWCSFRC 214
CCR RCC PC C C
Sbjct: 103 CCRTCCCTRCCTCCRPCCCGCGC 125
>U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defective
protein 9, isoforma protein.
Length = 357
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 307 SPAARKLAAKHLLTPRLKLTPNDMGILSHAATP 209
+P K+ A H +TPR + TP D+ + P
Sbjct: 112 TPVVSKIVATHTVTPRSRPTPKDIKEILETIAP 144
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 307 SPAARKLAAKHLLTPRLKLTPNDMGILSHAATP 209
+P K+ A H +TPR + TP D+ + P
Sbjct: 207 TPVVSKIVATHTVTPRSRPTPKDIKEILETIAP 239
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 307 SPAARKLAAKHLLTPRLKLTPNDMGILSHAATP 209
+P K+ A H +TPR + TP D+ + P
Sbjct: 190 TPVVSKIVATHTVTPRSRPTPKDIKEILETIAP 222
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
R07G3.3c protein.
Length = 1316
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 685 ETISAIARNQDATVNGRIGVDGSSLSSEKEERYPILQTPSPRPGEGASPLMT 530
E++SA NQ+ T+ ++ DGS SS E +LQ E S MT
Sbjct: 1113 ESLSANLTNQNTTMEVKVNTDGS--SSTVENLQSLLQFVRQSKDEATSRAMT 1162
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 685 ETISAIARNQDATVNGRIGVDGSSLSSEKEERYPILQTPSPRPGEGASPLMT 530
E++SA NQ+ T+ ++ DGS SS E +LQ E S MT
Sbjct: 1113 ESLSANLTNQNTTMEVKVNTDGS--SSTVENLQSLLQFVRQSKDEATSRAMT 1162
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 685 ETISAIARNQDATVNGRIGVDGSSLSSEKEERYPILQTPSPRPGEGASPLMT 530
E++SA NQ+ T+ ++ DGS SS E +LQ E S MT
Sbjct: 1113 ESLSANLTNQNTTMEVKVNTDGS--SSTVENLQSLLQFVRQSKDEATSRAMT 1162
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 220 AATPKRTPTRRPLVATPSTNKNTATST 140
AA P PTR PL+ T T N A T
Sbjct: 420 AAPPTPPPTRLPLITTIGTTTNPAVRT 446
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,691,359
Number of Sequences: 27780
Number of extensions: 241064
Number of successful extensions: 1300
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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