Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_I10
(877 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprot... 106 3e-23
AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p pro... 106 3e-23
AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA... 106 3e-23
BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p pro... 38 0.024
AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-P... 38 0.024
BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p pro... 34 0.30
AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA ... 34 0.30
AE013599-3518|AAN16119.1| 281|Drosophila melanogaster CG32834-P... 31 1.6
BT003597-1|AAO39600.1| 94|Drosophila melanogaster GM19936p pro... 30 3.6
AE014134-1360|AAF52576.1| 94|Drosophila melanogaster CG18591-P... 30 3.6
AY071355-1|AAL48977.1| 631|Drosophila melanogaster RE39037p pro... 29 6.4
AE014296-831|AAF47887.2| 631|Drosophila melanogaster CG15015-PA... 29 6.4
>L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprotein
protein.
Length = 199
Score = 106 bits (255), Expect = 3e-23
Identities = 60/122 (49%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Frame = -2
Query: 876 RTFXGTFKAFDKHMNLILGDCEEFXKIKSXNSXTADREXXRTLGFVLLRGENIVSLTI-- 703
RTF GTFKAFDKHMNLILGDCEEF KI+S NS +RE R LGFVLLRGENIVSLT+
Sbjct: 25 RTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEG 84
Query: 702 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGVGGPSQQHMAPGN 523
RGVGGP+QQHMAP
Sbjct: 85 PPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMG 144
Query: 522 RG 517
RG
Sbjct: 145 RG 146
>AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p
protein.
Length = 199
Score = 106 bits (255), Expect = 3e-23
Identities = 60/122 (49%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Frame = -2
Query: 876 RTFXGTFKAFDKHMNLILGDCEEFXKIKSXNSXTADREXXRTLGFVLLRGENIVSLTI-- 703
RTF GTFKAFDKHMNLILGDCEEF KI+S NS +RE R LGFVLLRGENIVSLT+
Sbjct: 25 RTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEG 84
Query: 702 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGVGGPSQQHMAPGN 523
RGVGGP+QQHMAP
Sbjct: 85 PPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMG 144
Query: 522 RG 517
RG
Sbjct: 145 RG 146
>AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA
protein.
Length = 199
Score = 106 bits (255), Expect = 3e-23
Identities = 60/122 (49%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Frame = -2
Query: 876 RTFXGTFKAFDKHMNLILGDCEEFXKIKSXNSXTADREXXRTLGFVLLRGENIVSLTI-- 703
RTF GTFKAFDKHMNLILGDCEEF KI+S NS +RE R LGFVLLRGENIVSLT+
Sbjct: 25 RTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEG 84
Query: 702 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGVGGPSQQHMAPGN 523
RGVGGP+QQHMAP
Sbjct: 85 PPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMG 144
Query: 522 RG 517
RG
Sbjct: 145 RG 146
>BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p
protein.
Length = 103
Score = 37.5 bits (83), Expect = 0.024
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -2
Query: 876 RTFXGTFKAFDKHMNLILGDCEEFXKIKSXNSXTAD---REXXRTLGFVLLRGENIV 715
R G AFD+H+N++LGD EE + T + + RT+ + +RG+ ++
Sbjct: 38 RELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPMLFVRGDGVI 94
>AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-PA
protein.
Length = 103
Score = 37.5 bits (83), Expect = 0.024
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -2
Query: 876 RTFXGTFKAFDKHMNLILGDCEEFXKIKSXNSXTAD---REXXRTLGFVLLRGENIV 715
R G AFD+H+N++LGD EE + T + + RT+ + +RG+ ++
Sbjct: 38 RELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPMLFVRGDGVI 94
>BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p
protein.
Length = 95
Score = 33.9 bits (74), Expect = 0.30
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -2
Query: 876 RTFXGTFKAFDKHMNLILGDCEEFXKIKSXNSXTADREXXRTLGFVLLRGENI 718
R F GT K FD+ +N+I+ +C E ++ S S LG ++RG+NI
Sbjct: 20 RNFIGTLKGFDQTINIIIDECHE--RVFSTTSGIEQ----IVLGLHIIRGDNI 66
>AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA
protein.
Length = 95
Score = 33.9 bits (74), Expect = 0.30
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -2
Query: 876 RTFXGTFKAFDKHMNLILGDCEEFXKIKSXNSXTADREXXRTLGFVLLRGENI 718
R F GT K FD+ +N+I+ +C E ++ S S LG ++RG+NI
Sbjct: 20 RNFIGTLKGFDQTINIIIDECHE--RVFSTTSGIEQ----IVLGLHIIRGDNI 66
>AE013599-3518|AAN16119.1| 281|Drosophila melanogaster CG32834-PA
protein.
Length = 281
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -1
Query: 484 PHDG-WPSSRNDGSSSWHGSWWAR 416
P DG W + GS+SW GSWW R
Sbjct: 138 PDDGSWCTVSGWGSTSWWGSWWDR 161
>BT003597-1|AAO39600.1| 94|Drosophila melanogaster GM19936p
protein.
Length = 94
Score = 30.3 bits (65), Expect = 3.6
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = -2
Query: 864 GTFKAFDKHMNLILGDCEEFXKIKSXNSXTADREXXRTLGFVLLRGENI 718
G FD++MNL+L D EE +K T R R LG ++L+G+NI
Sbjct: 44 GHIVGFDEYMNLVLDDAEEVY-VK-----TRQR---RNLGRIMLKGDNI 83
>AE014134-1360|AAF52576.1| 94|Drosophila melanogaster CG18591-PA
protein.
Length = 94
Score = 30.3 bits (65), Expect = 3.6
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = -2
Query: 864 GTFKAFDKHMNLILGDCEEFXKIKSXNSXTADREXXRTLGFVLLRGENI 718
G FD++MNL+L D EE +K T R R LG ++L+G+NI
Sbjct: 44 GHIVGFDEYMNLVLDDAEEVY-VK-----TRQR---RNLGRIMLKGDNI 83
>AY071355-1|AAL48977.1| 631|Drosophila melanogaster RE39037p
protein.
Length = 631
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 13 GQQGVSLPGVKQLLEPDTNNVNATTYFETQVRSLNP 120
G SLPG Q + N + TY+ET+V +LNP
Sbjct: 532 GTSHTSLPGSGQG-SANENAIGEDTYYETEVETLNP 566
>AE014296-831|AAF47887.2| 631|Drosophila melanogaster CG15015-PA
protein.
Length = 631
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 13 GQQGVSLPGVKQLLEPDTNNVNATTYFETQVRSLNP 120
G SLPG Q + N + TY+ET+V +LNP
Sbjct: 532 GTSHTSLPGSGQG-SANENAIGEDTYYETEVETLNP 566
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,879,634
Number of Sequences: 53049
Number of extensions: 548793
Number of successful extensions: 1358
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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