Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_I08
         (557 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical...    27   6.9  
Z81524-1|CAB04249.1|  356|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81044-12|CAB02811.2|  527|Caenorhabditis elegans Hypothetical p...    27   9.1  

>AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.2 protein.
          Length = 1140

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +3

Query: 411 CFFFKQKTHFSCRIMYT*FSLTNLSYLLEFFYFQTFIYYYKE 536
           C   ++K     R+M+   S+ ++ +L+ FF FQ   ++Y +
Sbjct: 61  CISKREKCVNLKRLMFERLSINDILFLIPFFNFQVLQFWYSD 102


>Z81524-1|CAB04249.1|  356|Caenorhabditis elegans Hypothetical
           protein F32H5.1 protein.
          Length = 356

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 21  IKCSVKAKQTCQRQCHSRLTPFIVYKMNKH 110
           + C      TC+  C S +T  I YK +KH
Sbjct: 215 VPCPGYHTPTCEEHCTSNITWPIAYKQDKH 244


>Z81044-12|CAB02811.2|  527|Caenorhabditis elegans Hypothetical
           protein C30H6.5 protein.
          Length = 527

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 45  QTCQRQCHSRLTPFIVYKMNKHKFVFKECLIN 140
           +TC RQC   L  F    +N + F  K C++N
Sbjct: 343 ETCMRQCAQSLQNFYCASIN-YSFGLKICILN 373


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,050,443
Number of Sequences: 27780
Number of extensions: 245251
Number of successful extensions: 601
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)