Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_I03
         (308 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118790-1|AAM50650.1|   68|Drosophila melanogaster GH15688p pro...    28   2.0  
AE014296-3570|AAF51742.1|   68|Drosophila melanogaster CG7181-PA...    28   2.0  
AY052077-1|AAK93501.1|  817|Drosophila melanogaster SD03168p pro...    27   6.2  

>AY118790-1|AAM50650.1|   68|Drosophila melanogaster GH15688p
           protein.
          Length = 68

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 147 KVSRGEMIFLASLMVVGWSAIPAWVLVNIKHYR 49
           ++S  E + L   M      IPAWVL +I+ Y+
Sbjct: 33  RISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65


>AE014296-3570|AAF51742.1|   68|Drosophila melanogaster CG7181-PA
           protein.
          Length = 68

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 147 KVSRGEMIFLASLMVVGWSAIPAWVLVNIKHYR 49
           ++S  E + L   M      IPAWVL +I+ Y+
Sbjct: 33  RISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65


>AY052077-1|AAK93501.1|  817|Drosophila melanogaster SD03168p
           protein.
          Length = 817

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 88  GRPAHHHQAGEEDHLTSGNLXFLAEC 165
           G P HHHQ    +  +SG    L  C
Sbjct: 781 GGPQHHHQHNNNNSSSSGEKHLLTHC 806


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,351,682
Number of Sequences: 53049
Number of extensions: 248497
Number of successful extensions: 926
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)