Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_I01
         (693 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0708 - 5298456-5298664,5299615-5299768,5300209-5300301,530...    29   3.5  
09_04_0683 - 19431034-19431495,19431632-19431997,19432055-194323...    28   8.1  
08_02_1618 + 28280414-28281193                                         28   8.1  
02_02_0503 + 11008475-11008793,11009983-11010140,11011863-110121...    28   8.1  

>02_01_0708 -
           5298456-5298664,5299615-5299768,5300209-5300301,
           5300644-5300847,5302034-5302174,5302723-5302827,
           5303485-5303874,5304573-5304713,5304756-5304845,
           5305779-5306288
          Length = 678

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/27 (40%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +2

Query: 503 YWPRLGQHMDKLLLNRTVNAWSR-FVL 580
           Y+P+LG+H+ K+ ++  +N W + FVL
Sbjct: 466 YYPQLGEHLAKVGVDPAINKWDQPFVL 492


>09_04_0683 -
           19431034-19431495,19431632-19431997,19432055-19432326,
           19433621-19433686,19433924-19433978,19434509-19434577,
           19435200-19435307,19435394-19435462,19435883-19436038,
           19436089-19436229,19436514-19436568,19437103-19437233,
           19437382-19437486
          Length = 684

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = -3

Query: 643 SINQF*PTNFEVLLTNFKKLLQHKSTPCIYCSVKQKFVHVLAEPWPIFVAVVKNR*FCLK 464
           SIN        VL+T  ++   HK     Y S+   FV ++  PW +   +V      L 
Sbjct: 80  SINVLLTNPIWVLVTRMQEAPNHKD----YWSMTS-FVKLVGRPWSVVTKLVLTMQLLLN 134

Query: 463 FNIIYKFK 440
           +NI+  FK
Sbjct: 135 WNILILFK 142


>08_02_1618 + 28280414-28281193
          Length = 259

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 132 SSVKHTECMKADSILVVVGGSFCASTALSXLVDVRVLTCSK 10
           SS   T C   D++L ++    CA  A   + + RVL C+K
Sbjct: 77  SSPASTPCSNPDAVLALLSTGLCADLAAVVVAEPRVL-CAK 116


>02_02_0503 +
           11008475-11008793,11009983-11010140,11011863-11012102,
           11013502-11013757,11013846-11014057,11014413-11014453,
           11014531-11014567
          Length = 420

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 678 YLMRVQXTDTKVALTNFNQLILKCC*QILKNYYNTNL 568
           YL  V     +     FNQL++    Q +KN YN N+
Sbjct: 210 YLRNVSGVQMRYLPWEFNQLLVNAMRQEIKNLYNINV 246


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,112,179
Number of Sequences: 37544
Number of extensions: 265997
Number of successful extensions: 442
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)