Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_H24
         (669 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0140 + 5759374-5759567,5759972-5760194                           31   0.83 
05_03_0467 - 14366969-14367742,14368335-14368754,14370339-143704...    30   1.5  
05_03_0338 + 12652966-12653017,12653813-12653860,12653924-126540...    28   5.9  
06_03_0499 + 21461608-21463427,21463517-21463627,21463867-214641...    28   7.7  

>10_02_0140 + 5759374-5759567,5759972-5760194
          Length = 138

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -3

Query: 424 LCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAETFHKDKKPN 296
           +CI+DPF+ S +    +  + +  + + F+ AAE  H D  P+
Sbjct: 82  ICIEDPFETSHDLGRVVDNRSIWALREEFERAAEILHLDPNPS 124


>05_03_0467 -
           14366969-14367742,14368335-14368754,14370339-14370496,
           14370571-14370664,14371536-14371649,14371794-14371985,
           14372095-14372176,14372280-14372471,14372773-14373371
          Length = 874

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 268 TENIYQEVKYKHRKTKFLHNKVQKVQFNVFR 176
           TE +Y E  YKHRK++F++ K+  +    +R
Sbjct: 249 TEWVYNENIYKHRKSRFVYTKLLSILGKAWR 279


>05_03_0338 +
           12652966-12653017,12653813-12653860,12653924-12654080,
           12654104-12654206,12654866-12655111,12655802-12656204,
           12656257-12656354,12656460-12657044,12657120-12657566
          Length = 712

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
 Frame = -3

Query: 646 FYEFVRITNNESLYKLLGGFFSYYGTFDFEENIICPYL-----------GFPIRKKSFDL 500
           F   ++I  N+++  +  G  S +   DF   I CP +           G  ++ K +D+
Sbjct: 509 FSVIIQINGNKAVELIDSGSTSTFMDMDFAVKIQCPLMTSKIKRAVVAGGGELKSKGYDI 568

Query: 499 FLTNFSLYQHNVAAEVCKPLRLDTSL 422
            L    +YQH+      K ++LD ++
Sbjct: 569 ILGANWIYQHSPITLDLKQIKLDITV 594


>06_03_0499 + 21461608-21463427,21463517-21463627,21463867-21464143,
            21464265-21464353,21464508-21464595,21464698-21464907,
            21464985-21465110,21465429-21465620,21466532-21467188
          Length = 1189

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -1

Query: 144  LQNEGKDNLFFFFYKMIKYACIMIKSKIKFIVTNVCSVYKYFVK 13
            L  +G  NLFF +Y+++ +    + S +     N+C  Y   ++
Sbjct: 975  LYQQGPRNLFFDWYRILGWMANGLYSSLAIFFLNICIFYDQAIR 1018


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,564,418
Number of Sequences: 37544
Number of extensions: 298904
Number of successful extensions: 656
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)