Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_H24
(669 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031688-1|AAH31688.1| 490|Homo sapiens TEKT3 protein protein. 34 0.53
AK223534-1|BAD97254.1| 490|Homo sapiens tektin 3 variant protein. 34 0.53
AK057390-1|BAB71464.1| 490|Homo sapiens protein ( Homo sapiens ... 34 0.53
AF334676-1|AAK15340.1| 490|Homo sapiens testicular microtubules... 34 0.53
BC070104-1|AAH70104.1| 707|Homo sapiens KIAA1841 protein. 31 4.9
BC039298-1|AAH39298.1| 572|Homo sapiens KIAA1841 protein protein. 31 4.9
AK131267-1|BAD18445.1| 379|Homo sapiens protein ( Homo sapiens ... 31 4.9
AB058744-1|BAB47470.1| 523|Homo sapiens KIAA1841 protein protein. 31 4.9
BC061703-1|AAH61703.1| 582|Homo sapiens PAP associated domain c... 30 6.5
AY364242-1|AAQ76801.1| 582|Homo sapiens hypothetical protein pr... 30 6.5
AL353796-1|CAH72262.1| 582|Homo sapiens novel protein protein. 30 6.5
AL161651-3|CAI14218.1| 582|Homo sapiens novel protein protein. 30 6.5
AK022188-1|BAB13981.1| 582|Homo sapiens protein ( Homo sapiens ... 30 6.5
AK001348-1|BAA91641.1| 582|Homo sapiens protein ( Homo sapiens ... 30 6.5
AB194709-1|BAD98252.1| 582|Homo sapiens mitochondrial polyA pol... 30 6.5
>BC031688-1|AAH31688.1| 490|Homo sapiens TEKT3 protein protein.
Length = 490
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = -3
Query: 556 ENIICPYLG----FPIRKKSFDLFLTNFSLYQH-NVAAEVCKPLRLDTSLCIQDPFDHSR 392
EN + P++ F R D + +N + YQ N + + LR+DTS IQD + +R
Sbjct: 77 ENTMLPFVSNRTTFFTRYTPDDWYRSNLTNYQESNTSRHNSEKLRVDTSRLIQDKYQQTR 136
Query: 391 NCSVNIYPKLVTRIVDLFKSAAETFHK 311
+ L R+ D+ +E H+
Sbjct: 137 KTQADTTQNLGERVNDIGFWKSEIIHE 163
>AK223534-1|BAD97254.1| 490|Homo sapiens tektin 3 variant protein.
Length = 490
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = -3
Query: 556 ENIICPYLG----FPIRKKSFDLFLTNFSLYQH-NVAAEVCKPLRLDTSLCIQDPFDHSR 392
EN + P++ F R D + +N + YQ N + + LR+DTS IQD + +R
Sbjct: 77 ENTMLPFVSNRTTFFTRYTPDDWYRSNLTNYQESNTSRHNSEKLRVDTSRLIQDKYQQTR 136
Query: 391 NCSVNIYPKLVTRIVDLFKSAAETFHK 311
+ L R+ D+ +E H+
Sbjct: 137 KTQADTTQNLGERVNDIGFWKSEIIHE 163
>AK057390-1|BAB71464.1| 490|Homo sapiens protein ( Homo sapiens
cDNA FLJ32828 fis, clone TESTI2003117, weakly similar to
Tektin A1. ).
Length = 490
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = -3
Query: 556 ENIICPYLG----FPIRKKSFDLFLTNFSLYQH-NVAAEVCKPLRLDTSLCIQDPFDHSR 392
EN + P++ F R D + +N + YQ N + + LR+DTS IQD + +R
Sbjct: 77 ENTMLPFVSNRTTFFTRYTPDDWYRSNLTNYQESNTSRHNSEKLRVDTSRLIQDKYQQTR 136
Query: 391 NCSVNIYPKLVTRIVDLFKSAAETFHK 311
+ L R+ D+ +E H+
Sbjct: 137 KTQADTTQNLGERVNDIGFWKSEIIHE 163
>AF334676-1|AAK15340.1| 490|Homo sapiens testicular
microtubules-related protein TEKTIN3 protein.
Length = 490
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = -3
Query: 556 ENIICPYLG----FPIRKKSFDLFLTNFSLYQH-NVAAEVCKPLRLDTSLCIQDPFDHSR 392
EN + P++ F R D + +N + YQ N + + LR+DTS IQD + +R
Sbjct: 77 ENTMLPFVSNRTTFFTRYTPDDWYRSNLTNYQESNTSRHNSEKLRVDTSRLIQDKYQQTR 136
Query: 391 NCSVNIYPKLVTRIVDLFKSAAETFHK 311
+ L R+ D+ +E H+
Sbjct: 137 KTQADTTQNLGERVNDIGFWKSEIIHE 163
>BC070104-1|AAH70104.1| 707|Homo sapiens KIAA1841 protein.
Length = 707
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 CSVN-IYPKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIY 254
C++N I L+TRI DLF KDKK F ++ K E ++
Sbjct: 263 CNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLFCKKIERLF 308
>BC039298-1|AAH39298.1| 572|Homo sapiens KIAA1841 protein protein.
Length = 572
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 CSVN-IYPKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIY 254
C++N I L+TRI DLF KDKK F ++ K E ++
Sbjct: 117 CNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLFCKKIERLF 162
>AK131267-1|BAD18445.1| 379|Homo sapiens protein ( Homo sapiens
cDNA FLJ16202 fis, clone CTONG2015596. ).
Length = 379
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 CSVN-IYPKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIY 254
C++N I L+TRI DLF KDKK F ++ K E ++
Sbjct: 263 CNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLFCKKIERLF 308
>AB058744-1|BAB47470.1| 523|Homo sapiens KIAA1841 protein protein.
Length = 523
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 CSVN-IYPKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIY 254
C++N I L+TRI DLF KDKK F ++ K E ++
Sbjct: 68 CNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLFCKKIERLF 113
>BC061703-1|AAH61703.1| 582|Homo sapiens PAP associated domain
containing 1 protein.
Length = 582
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 622 NNESLYKLLGGFFSYYGTFDFEENII 545
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AY364242-1|AAQ76801.1| 582|Homo sapiens hypothetical protein
protein.
Length = 582
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 622 NNESLYKLLGGFFSYYGTFDFEENII 545
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AL353796-1|CAH72262.1| 582|Homo sapiens novel protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 622 NNESLYKLLGGFFSYYGTFDFEENII 545
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AL161651-3|CAI14218.1| 582|Homo sapiens novel protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 622 NNESLYKLLGGFFSYYGTFDFEENII 545
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AK022188-1|BAB13981.1| 582|Homo sapiens protein ( Homo sapiens
cDNA FLJ12126 fis, clone MAMMA1000163. ).
Length = 582
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 622 NNESLYKLLGGFFSYYGTFDFEENII 545
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AK001348-1|BAA91641.1| 582|Homo sapiens protein ( Homo sapiens
cDNA FLJ10486 fis, clone NT2RP2000205. ).
Length = 582
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 622 NNESLYKLLGGFFSYYGTFDFEENII 545
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AB194709-1|BAD98252.1| 582|Homo sapiens mitochondrial polyA
polymerase protein.
Length = 582
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 622 NNESLYKLLGGFFSYYGTFDFEENII 545
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,469,371
Number of Sequences: 237096
Number of extensions: 1820469
Number of successful extensions: 3836
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3836
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -