Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_H24
         (669 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr...    39   0.004
AC006769-1|AAF60590.2|  287|Caenorhabditis elegans Hypothetical ...    31   0.74 
AC006722-17|ABP57812.1|  141|Caenorhabditis elegans Hypothetical...    31   0.74 
AF039719-7|AAB96748.1|  441|Caenorhabditis elegans Mutator prote...    31   0.98 
Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical ...    29   2.3  
AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical ...    29   2.3  
Z92784-7|CAE54895.1|  808|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z92784-6|CAB07197.1|  805|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81526-9|CAE54892.1|  808|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81526-8|CAB04268.1|  805|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U80448-10|AAB37823.1|  482|Caenorhabditis elegans Hypothetical p...    28   6.9  

>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
            K10D2.3 protein.
          Length = 1425

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 31/108 (28%), Positives = 49/108 (45%)
 Frame = -3

Query: 622  NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKKSFDLFLTNFSLYQHNVAAEVCKP 443
            N ES  +LL G+F YY  FDF   ++        R+   ++ L+           E  +P
Sbjct: 1242 NKESCAQLLIGYFDYYSRFDFRNFVV------QCRR---EMILSKME-------KEWPRP 1285

Query: 442  LRLDTSLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAETFHKDKKP 299
            L      C++DPFD S N S  +  K+   I+ +F ++   F  +K P
Sbjct: 1286 L------CVEDPFDLSHNLSSGVNKKMFVFIMKVFINSRAVFMSEKPP 1327


>AC006769-1|AAF60590.2|  287|Caenorhabditis elegans Hypothetical
           protein Y45G12C.8 protein.
          Length = 287

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 204 TLLCKNFVFLCLYLTS*YIFSVFFCK 281
           ++L   F FL LYL S  +FS+F+CK
Sbjct: 9   SILAILFSFLALYLNSFILFSIFYCK 34


>AC006722-17|ABP57812.1|  141|Caenorhabditis elegans Hypothetical
           protein Y19D10A.17 protein.
          Length = 141

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 204 TLLCKNFVFLCLYLTS*YIFSVFFCK 281
           ++L   F FL LYL S  +FS+F+CK
Sbjct: 9   SILAILFSFLALYLNSFILFSIFYCK 34


>AF039719-7|AAB96748.1|  441|Caenorhabditis elegans Mutator protein
           2, isoform a protein.
          Length = 441

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
 Frame = -3

Query: 622 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKKSFDLFLTNFSLYQHNVAAEVCKP 443
           NN  L +L   F  YY  F+F+EN    Y+G      +  + + +    Q+N+       
Sbjct: 303 NNAPLARLFIEFLYYYSMFNFKEN----YIG------ARPVMVMDRRTSQNNMVRS---- 348

Query: 442 LRLDTSLCIQDPFD-HSRNCSVNIYPKLVTRIVDLFKSAAETF 317
              +  +CIQDPFD H+   +V    + + RI D+ +S  + F
Sbjct: 349 -STNKEVCIQDPFDEHNPGRTV----RTLNRIKDVMRSTYQKF 386


>Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical
           protein F09B12.2 protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 430 CPVAMVCILQRQHYVDIRKNLLRISQSFFFLSEILNMDIL 549
           CPV  VCIL+R H+       +      +F++ ++N+ I+
Sbjct: 119 CPVCDVCILRRDHHCSFGAVCVGHFNQRYFVAAVINLFIM 158


>Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical
           protein ZK1067.5 protein.
          Length = 427

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 24/91 (26%), Positives = 39/91 (42%)
 Frame = +3

Query: 255 YIFSVFFCKISLRKLGFLSL*NVSAADLKRSTILVTNLGYILTEQFLE*SNGSCIHKEVS 434
           ++ S +FC +SL  +GF  L  V   +    +I+   +G ILT   ++ S    I K  S
Sbjct: 320 FLDSFYFCLVSLLTVGFGDLHPVGTVEYMLCSIVFIFIGLILTTLAVDVSGSVGIAKMHS 379

Query: 435 SRNGLHTSAATLC*YKEKFVKNKSKLFFLIG 527
              G           K++ VK    +  L+G
Sbjct: 380 IGRGFDAMKMLNALRKKETVKKFQIMLELMG 410


>AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical
           protein Y26D4A.14 protein.
          Length = 952

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +1

Query: 448 CILQRQHYVDIRKNLLRISQSFF--FLSEILNMDILY 552
           C    Q+Y+ + KN +R + +FF  F  + LN+D +Y
Sbjct: 866 CFYISQNYIKLPKNTIRENANFFIVFTQDKLNLDYIY 902


>AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical
           protein Y40C7B.1 protein.
          Length = 916

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +1

Query: 448 CILQRQHYVDIRKNLLRISQSFF--FLSEILNMDILY 552
           C    Q+Y+ + KN +R + +FF  F  + LN+D +Y
Sbjct: 830 CFYISQNYIKLPKNTIRENANFFIVFTQDKLNLDYIY 866


>Z92784-7|CAE54895.1|  808|Caenorhabditis elegans Hypothetical
           protein F31C3.2b protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -3

Query: 622 NNESLYKLLGGFFSYYGTFDF 560
           N  SL +LL GFF YY  FDF
Sbjct: 707 NTWSLGELLIGFFQYYNEFDF 727


>Z92784-6|CAB07197.1|  805|Caenorhabditis elegans Hypothetical
           protein F31C3.2a protein.
          Length = 805

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -3

Query: 622 NNESLYKLLGGFFSYYGTFDF 560
           N  SL +LL GFF YY  FDF
Sbjct: 704 NTWSLGELLIGFFQYYNEFDF 724


>Z81526-9|CAE54892.1|  808|Caenorhabditis elegans Hypothetical
           protein F31C3.2b protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -3

Query: 622 NNESLYKLLGGFFSYYGTFDF 560
           N  SL +LL GFF YY  FDF
Sbjct: 707 NTWSLGELLIGFFQYYNEFDF 727


>Z81526-8|CAB04268.1|  805|Caenorhabditis elegans Hypothetical
           protein F31C3.2a protein.
          Length = 805

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -3

Query: 622 NNESLYKLLGGFFSYYGTFDF 560
           N  SL +LL GFF YY  FDF
Sbjct: 704 NTWSLGELLIGFFQYYNEFDF 724


>U80448-10|AAB37823.1|  482|Caenorhabditis elegans Hypothetical
           protein F59A3.9 protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -3

Query: 622 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKK 512
           N  SL  L  GF  YY  F+F+ N I    G  ++KK
Sbjct: 285 NTSSLAVLFIGFMKYYSEFNFKWNWISIKHGNVLKKK 321


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,210,220
Number of Sequences: 27780
Number of extensions: 331768
Number of successful extensions: 1151
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)