Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_H22
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF015898-1|ABM64209.1| 586|Homo sapiens photolyase-like cryptoc... 243 4e-64
D84657-1|BAA12710.1| 586|Homo sapiens photolyase homolog protein. 243 4e-64
D83702-1|BAA12068.1| 586|Homo sapiens photolyase protein. 243 4e-64
BC030519-1|AAH30519.1| 586|Homo sapiens cryptochrome 1 (photoly... 243 4e-64
EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like cryptoc... 241 1e-63
BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2 (photoly... 241 1e-63
AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein. 241 1e-63
BC035161-1|AAH35161.1| 461|Homo sapiens CRY2 protein protein. 239 5e-63
AK098615-1|BAC05354.1| 194|Homo sapiens protein ( Homo sapiens ... 97 6e-20
AK129846-1|BAC85241.1| 236|Homo sapiens protein ( Homo sapiens ... 31 2.7
BC035757-1|AAH35757.2| 440|Homo sapiens secretin receptor protein. 30 8.1
>EF015898-1|ABM64209.1| 586|Homo sapiens photolyase-like
cryptochrome 1 protein.
Length = 586
Score = 243 bits (595), Expect = 4e-64
Identities = 99/160 (61%), Positives = 127/160 (79%)
Frame = -3
Query: 641 WAEGXTGYPFVDAIMRQLXQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYD 462
WAEG TG+P++DAIM QL QEGWIHHLARH VACFLTRGDLWISWEEG K+FE+ LLD D
Sbjct: 330 WAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDAD 389
Query: 461 WSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPREYIYEPWK 282
WS+NAG+WMWLS S+FF ++F Y PV FG++TD G YI++Y+P L+ +P +YIY+PW
Sbjct: 390 WSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWN 449
Query: 281 APQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 162
AP+ IQ+ A C+IG +YPK +VNH + NI++M Y+
Sbjct: 450 APEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQ 489
>D84657-1|BAA12710.1| 586|Homo sapiens photolyase homolog protein.
Length = 586
Score = 243 bits (595), Expect = 4e-64
Identities = 99/160 (61%), Positives = 127/160 (79%)
Frame = -3
Query: 641 WAEGXTGYPFVDAIMRQLXQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYD 462
WAEG TG+P++DAIM QL QEGWIHHLARH VACFLTRGDLWISWEEG K+FE+ LLD D
Sbjct: 330 WAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDAD 389
Query: 461 WSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPREYIYEPWK 282
WS+NAG+WMWLS S+FF ++F Y PV FG++TD G YI++Y+P L+ +P +YIY+PW
Sbjct: 390 WSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWN 449
Query: 281 APQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 162
AP+ IQ+ A C+IG +YPK +VNH + NI++M Y+
Sbjct: 450 APEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQ 489
>D83702-1|BAA12068.1| 586|Homo sapiens photolyase protein.
Length = 586
Score = 243 bits (595), Expect = 4e-64
Identities = 99/160 (61%), Positives = 127/160 (79%)
Frame = -3
Query: 641 WAEGXTGYPFVDAIMRQLXQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYD 462
WAEG TG+P++DAIM QL QEGWIHHLARH VACFLTRGDLWISWEEG K+FE+ LLD D
Sbjct: 330 WAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDAD 389
Query: 461 WSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPREYIYEPWK 282
WS+NAG+WMWLS S+FF ++F Y PV FG++TD G YI++Y+P L+ +P +YIY+PW
Sbjct: 390 WSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWN 449
Query: 281 APQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 162
AP+ IQ+ A C+IG +YPK +VNH + NI++M Y+
Sbjct: 450 APEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQ 489
>BC030519-1|AAH30519.1| 586|Homo sapiens cryptochrome 1
(photolyase-like) protein.
Length = 586
Score = 243 bits (595), Expect = 4e-64
Identities = 99/160 (61%), Positives = 127/160 (79%)
Frame = -3
Query: 641 WAEGXTGYPFVDAIMRQLXQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYD 462
WAEG TG+P++DAIM QL QEGWIHHLARH VACFLTRGDLWISWEEG K+FE+ LLD D
Sbjct: 330 WAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDAD 389
Query: 461 WSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPREYIYEPWK 282
WS+NAG+WMWLS S+FF ++F Y PV FG++TD G YI++Y+P L+ +P +YIY+PW
Sbjct: 390 WSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWN 449
Query: 281 APQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 162
AP+ IQ+ A C+IG +YPK +VNH + NI++M Y+
Sbjct: 450 APEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQ 489
>EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like
cryptochrome 2 protein.
Length = 593
Score = 241 bits (590), Expect = 1e-63
Identities = 99/160 (61%), Positives = 126/160 (78%)
Frame = -3
Query: 641 WAEGXTGYPFVDAIMRQLXQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYD 462
WAEG TG+P++DAIM QL QEGWIHHLARH VACFLTRGDLW+SWE G ++F++ LLD D
Sbjct: 349 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDAD 408
Query: 461 WSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPREYIYEPWK 282
+S+NAG+WMWLS SAFF ++F Y PV FG++TD G YI++Y+P+LK +P YIYEPW
Sbjct: 409 FSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWN 468
Query: 281 APQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 162
AP+SIQ+ A CIIG YP+ IVNH + NI++M Y+
Sbjct: 469 APESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQ 508
>BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2
(photolyase-like) protein.
Length = 593
Score = 241 bits (590), Expect = 1e-63
Identities = 99/160 (61%), Positives = 126/160 (78%)
Frame = -3
Query: 641 WAEGXTGYPFVDAIMRQLXQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYD 462
WAEG TG+P++DAIM QL QEGWIHHLARH VACFLTRGDLW+SWE G ++F++ LLD D
Sbjct: 349 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDAD 408
Query: 461 WSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPREYIYEPWK 282
+S+NAG+WMWLS SAFF ++F Y PV FG++TD G YI++Y+P+LK +P YIYEPW
Sbjct: 409 FSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWN 468
Query: 281 APQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 162
AP+SIQ+ A CIIG YP+ IVNH + NI++M Y+
Sbjct: 469 APESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQ 508
>AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein.
Length = 589
Score = 241 bits (590), Expect = 1e-63
Identities = 99/160 (61%), Positives = 126/160 (78%)
Frame = -3
Query: 641 WAEGXTGYPFVDAIMRQLXQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYD 462
WAEG TG+P++DAIM QL QEGWIHHLARH VACFLTRGDLW+SWE G ++F++ LLD D
Sbjct: 345 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDAD 404
Query: 461 WSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPREYIYEPWK 282
+S+NAG+WMWLS SAFF ++F Y PV FG++TD G YI++Y+P+LK +P YIYEPW
Sbjct: 405 FSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWN 464
Query: 281 APQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 162
AP+SIQ+ A CIIG YP+ IVNH + NI++M Y+
Sbjct: 465 APESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQ 504
>BC035161-1|AAH35161.1| 461|Homo sapiens CRY2 protein protein.
Length = 461
Score = 239 bits (586), Expect = 5e-63
Identities = 98/160 (61%), Positives = 125/160 (78%)
Frame = -3
Query: 641 WAEGXTGYPFVDAIMRQLXQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYD 462
WAEG TG+P++DAIM QL QEGWIHHLARH VACFLTRGDLW+SWE G ++F++ LLD D
Sbjct: 217 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDAD 276
Query: 461 WSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPREYIYEPWK 282
+S+NAG+WMWLS AFF ++F Y PV FG++TD G YI++Y+P+LK +P YIYEPW
Sbjct: 277 FSVNAGSWMWLSCGAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWN 336
Query: 281 APQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 162
AP+SIQ+ A CIIG YP+ IVNH + NI++M Y+
Sbjct: 337 APESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQ 376
>AK098615-1|BAC05354.1| 194|Homo sapiens protein ( Homo sapiens
cDNA FLJ25749 fis, clone TST06111, highly similar to
Homo sapiens mRNA for photolyase. ).
Length = 194
Score = 96.7 bits (230), Expect = 6e-20
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = -3
Query: 416 FFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYPREYIYEPWKAPQSIQRNAGCIIGE 237
FF +F Y PV FG++TD G YI++Y+P L+ +P +YIY+ W AP+ IQ+ A C+IG
Sbjct: 13 FFNSFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDLWNAPEGIQKVAKCLIGV 72
Query: 236 HYPKRIVNHDTIHKENIQKMATAYK 162
+YPK +VNH + NI++M Y+
Sbjct: 73 NYPKPMVNHAEASRLNIERMKQIYQ 97
>AK129846-1|BAC85241.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ26336 fis, clone HRT02842. ).
Length = 236
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 174 CHFLYI---LFMYCIMVDYSFRIVFSYNTSCISLN*LRCFPWFIYIFSWI 314
C F+Y +MY + Y++ V+SY CI + C +IY++S++
Sbjct: 70 CIFIYTHMHTYMYIHIHAYAYIYVYSYTRICIHICVFICTHAYIYVYSYV 119
>BC035757-1|AAH35757.2| 440|Homo sapiens secretin receptor protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 174 CHFLYILFMYCIMVDYSFRIV 236
C + +LF YCIM +YS+ +V
Sbjct: 215 CKLIMVLFQYCIMANYSWLLV 235
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,489,143
Number of Sequences: 237096
Number of extensions: 1678293
Number of successful extensions: 6470
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6470
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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