Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_H19
(757 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 203 1e-52
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 168 4e-42
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 144 9e-35
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 115 4e-26
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464... 113 2e-25
07_03_1039 - 23454130-23454552,23454859-23455536 35 0.061
05_07_0261 + 28764571-28764733,28766039-28766153,28766241-287663... 32 0.43
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991... 29 3.0
08_02_0370 - 16333471-16333526,16333821-16333912,16334553-163346... 29 5.3
11_04_0071 - 13165019-13165082,13165345-13165428,13166325-131665... 28 9.2
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 28 9.2
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 203 bits (496), Expect = 1e-52
Identities = 98/253 (38%), Positives = 155/253 (61%), Gaps = 2/253 (0%)
Frame = -1
Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
LGWC+E QAY +V DDIMD S RRG PCW+R P+VG+ A ND +++ + + L+ +
Sbjct: 111 LGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLI-AVNDGIILRNHISRILQRH 169
Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXY 401
F+ Y+ + +LFNE ++T+ GQ LD +T + + D + + L +
Sbjct: 170 FKGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHRRIVQYKTAYYSF 229
Query: 400 NLPVSLGLLLA-ENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQER 224
LPV+ LLL+ EN+D + ++I +E+GT FQ+QDD++DC+GD GK+GTDI++
Sbjct: 230 YLPVACALLLSGENLDN--FGDVKNILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDY 287
Query: 223 KCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNI 44
KC+WL VQAL+R E Q+ + YG +P V ++K LY++L+L ++ E+ Y+ +
Sbjct: 288 KCSWLVVQALERADENQKHILFENYGKPDPECVAKVKDLYKELNLEAVFHEYERESYNKL 347
Query: 43 IRQIENIPIEAAR 5
I IE P +A +
Sbjct: 348 IADIEAHPNKAVQ 360
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 168 bits (409), Expect = 4e-42
Identities = 87/244 (35%), Positives = 134/244 (54%), Gaps = 1/244 (0%)
Frame = -1
Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
LGWCVE QA +V DDI D + RR CWY+ P VG++ A ND +L+ + +K
Sbjct: 143 LGWCVEWLQASALVLDDITDNAYTRRDNLCWYKLPTVGMS-AINDGVLLKCHVQAIIKRY 201
Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNRKT-DYSSFTLDRXXXXXXXXXXXXXY 401
F+ ++ + EL+NE +T+MGQ LD +T + D + + + +
Sbjct: 202 FKEKFYFLDLMELWNEIGLQTAMGQMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSF 261
Query: 400 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 221
LPV+ LLL Y +++ +E+G FQIQDD++DCFGD GKVGTDI++ K
Sbjct: 262 YLPVACALLL-NGARLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPEVIGKVGTDIEDYK 320
Query: 220 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 41
C+WL VQA++ E + + YG S+P V +K +Y +L L I+ E +Y +++
Sbjct: 321 CSWLIVQAMELANENEMKILYENYGKSDPKCVAEVKSVYRELDLQDIFLEYESRVYKHLV 380
Query: 40 RQIE 29
I+
Sbjct: 381 STID 384
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 144 bits (348), Expect = 9e-35
Identities = 72/206 (34%), Positives = 118/206 (57%), Gaps = 1/206 (0%)
Frame = -1
Query: 634 AFNDSLLIHSSLFEFLKTNFRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSS 458
A ND +++ + + L+ +FR Y + +LFNE ++T+ GQ LD +T + + D +
Sbjct: 117 AINDGIILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNK 176
Query: 457 FTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFID 278
+ + + LPV+ LLL+ D Y + +DI +++G FQ+QDD++D
Sbjct: 177 YNIGVHRRIVQYKTSYYSFYLPVACALLLSGE-DLTKYGAVEDILVKMGIYFQVQDDYLD 235
Query: 277 CFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYED 98
C+GD GK+GTDI++ KC+WL VQAL+R E+Q++V YG +PA V ++K LY +
Sbjct: 236 CYGDPKFIGKIGTDIEDYKCSWLVVQALERADESQKSVLFENYGKKDPACVAKVKSLYRE 295
Query: 97 LHLPQIYKHQEKAMYDNIIRQIENIP 20
L+L ++ E Y +I IE P
Sbjct: 296 LNLEAVFLDYENESYKKLIADIEAQP 321
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 115 bits (277), Expect = 4e-26
Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 1/189 (0%)
Frame = -1
Query: 652 EVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYIKMFELFNETLWRTSMGQHLDHV-TGNR 476
+VG+ ND +++ + +K FR P ++ + E+++E +TS+GQ LD + T
Sbjct: 190 QVGLR-GINDGIILKCHILIMIKKYFREKPYFLDILEIWSEIALQTSLGQMLDLISTHTG 248
Query: 475 KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQI 296
D + ++++ + LPV+ LLL+ E + +DI +E+G FQI
Sbjct: 249 ADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAKLED-FSGLKDILIEMGIYFQI 307
Query: 295 QDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERI 116
QDD++DCF D GK+GTDI++ KC+WL VQAL Q V YG + + V +
Sbjct: 308 QDDYLDCFADPNTIGKIGTDIEDHKCSWLIVQALGHADNNQIEVLHRNYGKKDSSSVSEV 367
Query: 115 KRLYEDLHL 89
KR Y L L
Sbjct: 368 KRTYAALDL 376
>01_06_0363 -
28745581-28745709,28746043-28746114,28746373-28746417,
28746523-28746618,28747029-28747080,28747232-28747305,
28747386-28747502,28747844-28747930,28748186-28748281,
28748508-28748654
Length = 304
Score = 113 bits (271), Expect = 2e-25
Identities = 65/170 (38%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Frame = -1
Query: 754 GWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNF 575
GW QAY +V DDIMD S RRG PCW+R P+VG+ A ND L++ S + + F
Sbjct: 79 GW---QLQAYFLVLDDIMDNSQTRRGKPCWFRLPKVGL-IAINDGLVLRSQISRIFRRYF 134
Query: 574 RTNPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNL 395
R Y+ + +LFNE +T+ GQ LD +T T+ L++ + L
Sbjct: 135 RGKSYYVDLLDLFNEVEIQTTSGQLLDQIT----TNEGRKDLNKYRRIVEYKTAYYSFYL 190
Query: 394 PVSLGLLL-AENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK 248
PV+ LLL E++D Y + I +E+G FQ QDD++DCFG+ GK
Sbjct: 191 PVACALLLFDESLDN--YAQVKHILVEMGVYFQSQDDYLDCFGEPEIIGK 238
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -1
Query: 187 CTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAA 8
C + K YG S+PA V ++K LY +LHL +++ E+ Y+ +I IE P EA
Sbjct: 229 CFGEPEIIGKENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAV 288
Query: 7 R 5
R
Sbjct: 289 R 289
>07_03_1039 - 23454130-23454552,23454859-23455536
Length = 366
Score = 35.1 bits (77), Expect = 0.061
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 391 VSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCT 215
V +G +L DE+I +S + IG +FQ+ DD +D + GK G D+ K T
Sbjct: 260 VVIGAILGGGSDEQI-ESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTT 318
Query: 214 WLAVQALQRCTE 179
+ + L++ E
Sbjct: 319 YPKLLGLEKSRE 330
>05_07_0261 +
28764571-28764733,28766039-28766153,28766241-28766344,
28766571-28766698,28766765-28767328
Length = 357
Score = 32.3 bits (70), Expect = 0.43
Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 3/188 (1%)
Frame = -1
Query: 745 VEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTN 566
+EM ++ DD++D S +RRG ++ + D + SS F N
Sbjct: 106 IEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSW-------FLAN 158
Query: 565 PNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVS 386
I++ +L ++ + + D +G K + F D +L S
Sbjct: 159 LENIEVIKLISQMMCSQVI---KDFASGEIKQASTLFDCDVTLDDYLLKSYYKTASLLAS 215
Query: 385 --LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCT 215
+ V I + + +G FQ+ DD +D + GK G+D+ + T
Sbjct: 216 STRSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLT 275
Query: 214 WLAVQALQ 191
+ ALQ
Sbjct: 276 APVIFALQ 283
>12_01_0979 -
9914779-9915327,9915409-9915536,9915947-9916050,
9919832-9919946,9921036-9921528
Length = 462
Score = 29.5 bits (63), Expect = 3.0
Identities = 38/188 (20%), Positives = 69/188 (36%), Gaps = 3/188 (1%)
Frame = -1
Query: 745 VEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTN 566
+EM ++ DD++D S +RRG ++ + D + SS F N
Sbjct: 216 IEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSW-------FLAN 268
Query: 565 PNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNL--P 392
I++ +L ++ + D +G K + F D +L
Sbjct: 269 LENIEVIKLISQVI--------KDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAA 320
Query: 391 VSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCT 215
+ + V I + + +G FQ+ DD +D + GK G+D+ + T
Sbjct: 321 STRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLT 380
Query: 214 WLAVQALQ 191
+ ALQ
Sbjct: 381 APVIFALQ 388
>08_02_0370 -
16333471-16333526,16333821-16333912,16334553-16334671,
16335152-16335226,16335328-16335393,16335507-16335563,
16335640-16335689,16335774-16335944,16337057-16337183,
16337658-16338017
Length = 390
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = -1
Query: 385 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLA 206
L +++ E + + +++ + T++Q+ + ID G E+K ++ IQE C L
Sbjct: 215 LPIIVLEMPSVLLMAAIRNVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELF 274
Query: 205 VQALQRCTEA 176
+ + TE+
Sbjct: 275 LTKVGDHTES 284
>11_04_0071 -
13165019-13165082,13165345-13165428,13166325-13166524,
13166756-13170655
Length = 1415
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/41 (21%), Positives = 19/41 (46%)
Frame = -1
Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITC 635
L WC F+ ++ +++++ G+ C GI+C
Sbjct: 774 LSWCSNRFEVSSVIEEEVLESLQPHSGLKCLSINGYGGISC 814
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 215 STFALLYICTNFTSFYFIT 271
STF L+Y+ +F SF+FIT
Sbjct: 467 STFGLVYLIYSFCSFHFIT 485
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,194,027
Number of Sequences: 37544
Number of extensions: 395100
Number of successful extensions: 825
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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