Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_H19
(757 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein. 208 1e-53
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 208 2e-53
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 208 2e-53
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 208 2e-53
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 208 2e-53
Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate sy... 190 4e-48
BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein. 171 3e-42
M87434-1|AAA60607.1| 727|Homo sapiens 71 kDa 2'5' oligoadenylat... 30 7.8
M87284-1|AAA60606.1| 687|Homo sapiens 2'5' oligoadenylate synth... 30 7.8
BC049215-1|AAH49215.1| 687|Homo sapiens 2'-5'-oligoadenylate sy... 30 7.8
>J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein.
Length = 353
Score = 208 bits (509), Expect = 1e-53
Identities = 102/244 (41%), Positives = 145/244 (59%), Gaps = 1/244 (0%)
Frame = -1
Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
+GWCVE+ QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 88 VGWCVELLQAFFLVADDIMDSSLTRRGQTCWYQKPGVGLD-AINDANLLEACIYRLLKLY 146
Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXY 401
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R +
Sbjct: 147 CREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSF 206
Query: 400 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 221
LP++ + +A EK + +A+ I LE+G FQIQDD++D FGD TGK+GTDIQ+ K
Sbjct: 207 YLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNK 266
Query: 220 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 41
C+WL VQ LQR T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 267 CSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIM 326
Query: 40 RQIE 29
IE
Sbjct: 327 ALIE 330
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 208 bits (507), Expect = 2e-53
Identities = 102/244 (41%), Positives = 145/244 (59%), Gaps = 1/244 (0%)
Frame = -1
Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
+GWCVE+ QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 81 VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLY 139
Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXY 401
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R +
Sbjct: 140 CREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSF 199
Query: 400 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 221
LP++ + +A EK + +A+ I LE+G FQIQDD++D FGD TGK+GTDIQ+ K
Sbjct: 200 YLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNK 259
Query: 220 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 41
C+WL VQ LQR T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 260 CSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIM 319
Query: 40 RQIE 29
IE
Sbjct: 320 ALIE 323
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 208 bits (507), Expect = 2e-53
Identities = 102/244 (41%), Positives = 145/244 (59%), Gaps = 1/244 (0%)
Frame = -1
Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
+GWCVE+ QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 155 VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLY 213
Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXY 401
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R +
Sbjct: 214 CREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSF 273
Query: 400 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 221
LP++ + +A EK + +A+ I LE+G FQIQDD++D FGD TGK+GTDIQ+ K
Sbjct: 274 YLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNK 333
Query: 220 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 41
C+WL VQ LQR T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 334 CSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIM 393
Query: 40 RQIE 29
IE
Sbjct: 394 ALIE 397
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 208 bits (507), Expect = 2e-53
Identities = 102/244 (41%), Positives = 145/244 (59%), Gaps = 1/244 (0%)
Frame = -1
Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
+GWCVE+ QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 154 VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLY 212
Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXY 401
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R +
Sbjct: 213 CREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSF 272
Query: 400 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 221
LP++ + +A EK + +A+ I LE+G FQIQDD++D FGD TGK+GTDIQ+ K
Sbjct: 273 YLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNK 332
Query: 220 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 41
C+WL VQ LQR T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 333 CSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIM 392
Query: 40 RQIE 29
IE
Sbjct: 393 ALIE 396
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 208 bits (507), Expect = 2e-53
Identities = 102/244 (41%), Positives = 145/244 (59%), Gaps = 1/244 (0%)
Frame = -1
Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
+GWCVE+ QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 154 VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLY 212
Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXY 401
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R +
Sbjct: 213 CREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSF 272
Query: 400 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 221
LP++ + +A EK + +A+ I LE+G FQIQDD++D FGD TGK+GTDIQ+ K
Sbjct: 273 YLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNK 332
Query: 220 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 41
C+WL VQ LQR T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 333 CSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIM 392
Query: 40 RQIE 29
IE
Sbjct: 393 ALIE 396
>Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate
synthetase like-4 protein.
Length = 348
Score = 190 bits (464), Expect = 4e-48
Identities = 97/244 (39%), Positives = 137/244 (56%), Gaps = 1/244 (0%)
Frame = -1
Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
+GWCVE+ QA+ +V DDIMD S RRG CWY++P VG+ A +D+ L+ + ++ LK
Sbjct: 83 VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AIDDANLLEACIYPLLKLY 141
Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXY 401
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R
Sbjct: 142 CREQPYYLNLIELFLQSSYQTEIGQTLDLLTXPQGNVDLVRFTEKRYISIVKYKTALSSS 201
Query: 400 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 221
LP++ V EK + +A I LE+G QIQDD+++ FGD TGK+GTDIQ+ K
Sbjct: 202 YLPIAAAXXXXGIVXEKEHANAXKILLEMGEFSQIQDDYLELFGDPSVTGKIGTDIQDXK 261
Query: 220 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 41
C L VQ L R T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 262 CNCLXVQCLXRATPEQYQILKENYGQKEAEKVPRVKALYEELDLPAVFLQYEEDSYSHIM 321
Query: 40 RQIE 29
IE
Sbjct: 322 ALIE 325
>BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein.
Length = 298
Score = 171 bits (415), Expect = 3e-42
Identities = 88/244 (36%), Positives = 134/244 (54%), Gaps = 1/244 (0%)
Frame = -1
Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
+GW ++ QA+ +V DDIMD S +G WY++ +G+ A ND++L+ + ++ LK
Sbjct: 56 VGWYAQLLQAFFLVADDIMDSSLTCQGQISWYQKLGMGLD-AINDAILLEACIYCLLKLY 114
Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXY 401
R P Y+ + ELF + ++T +GQ LD +T + D T R +
Sbjct: 115 CREQPYYLNLMELFQQNSYQTEIGQTLDLITTPQGNVDLRRCTEKRHKSVVKYKTAFYSF 174
Query: 400 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 221
LPV+ + ++ D+K + SA+ I LEI FQIQDD++D GD TG+VG D Q+ K
Sbjct: 175 YLPVAAAMYMSRMDDKKEHTSAKKILLEIQEFFQIQDDYLDFSGDPSVTGRVGNDFQDNK 234
Query: 220 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 41
C+WL VQ L + T Q + K Y E V R+K LYE+L LP ++ EK Y +++
Sbjct: 235 CSWLVVQCLLQATPEQYQILKENYRQKEAEKVARVKALYEELDLPAVFLQYEKDSYSHVM 294
Query: 40 RQIE 29
IE
Sbjct: 295 GLIE 298
>M87434-1|AAA60607.1| 727|Homo sapiens 71 kDa 2'5' oligoadenylate
synthetase protein.
Length = 727
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 246 LVQIYKSANVLGWQFKRCSAVLKHNVQYSKP 154
L+ +YKS+++ G +F C VL+ N S+P
Sbjct: 506 LIDLYKSSDLPGGEFSTCFTVLQRNFIRSRP 536
>M87284-1|AAA60606.1| 687|Homo sapiens 2'5' oligoadenylate
synthetase protein.
Length = 687
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 246 LVQIYKSANVLGWQFKRCSAVLKHNVQYSKP 154
L+ +YKS+++ G +F C VL+ N S+P
Sbjct: 506 LIDLYKSSDLPGGEFSTCFTVLQRNFIRSRP 536
>BC049215-1|AAH49215.1| 687|Homo sapiens 2'-5'-oligoadenylate
synthetase 2, 69/71kDa protein.
Length = 687
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 246 LVQIYKSANVLGWQFKRCSAVLKHNVQYSKP 154
L+ +YKS+++ G +F C VL+ N S+P
Sbjct: 506 LIDLYKSSDLPGGEFSTCFTVLQRNFIRSRP 536
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,573,536
Number of Sequences: 237096
Number of extensions: 2233821
Number of successful extensions: 4354
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4340
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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