Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_H19
         (757 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p pro...   221   1e-57
AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl pyr...   221   1e-57
AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p pro...   221   1e-57
AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-P...   221   1e-57
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P...    33   0.56 
AY069353-1|AAL39498.1|  696|Drosophila melanogaster LD05963p pro...    29   9.1  
AE014134-2323|AAF53277.1|  696|Drosophila melanogaster CG6116-PA...    29   9.1  

>AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p
           protein.
          Length = 419

 Score =  221 bits (539), Expect = 1e-57
 Identities = 105/243 (43%), Positives = 151/243 (62%)
 Frame = -1

Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
           LGWCVEM Q++ I+ DD+MD S+ RRG PCW++   VG+T A ND+L+I ++++  LK +
Sbjct: 157 LGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AINDALMIENAMYAILKKH 215

Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYN 398
           F     Y+ + ELF+E  + T+ GQ LD +  NR    S FT++              + 
Sbjct: 216 FSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFY 273

Query: 397 LPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 218
           LP +L L LA   D + ++ ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC
Sbjct: 274 LPFALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKC 333

Query: 217 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 38
           +WLAV A+QR    Q+ +   CYG  EPA VER+K LY++L LP  Y   E+  Y+ I  
Sbjct: 334 SWLAVVAMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKT 393

Query: 37  QIE 29
            I+
Sbjct: 394 HIQ 396


>AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl
           pyrophosphate synthase protein.
          Length = 380

 Score =  221 bits (539), Expect = 1e-57
 Identities = 105/243 (43%), Positives = 151/243 (62%)
 Frame = -1

Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
           LGWCVEM Q++ I+ DD+MD S+ RRG PCW++   VG+T A ND+L+I ++++  LK +
Sbjct: 118 LGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AINDALMIENAMYAILKKH 176

Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYN 398
           F     Y+ + ELF+E  + T+ GQ LD +  NR    S FT++              + 
Sbjct: 177 FSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFY 234

Query: 397 LPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 218
           LP +L L LA   D + ++ ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC
Sbjct: 235 LPFALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKC 294

Query: 217 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 38
           +WLAV A+QR    Q+ +   CYG  EPA VER+K LY++L LP  Y   E+  Y+ I  
Sbjct: 295 SWLAVVAMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKT 354

Query: 37  QIE 29
            I+
Sbjct: 355 HIQ 357


>AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p
           protein.
          Length = 419

 Score =  221 bits (539), Expect = 1e-57
 Identities = 105/243 (43%), Positives = 151/243 (62%)
 Frame = -1

Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
           LGWCVEM Q++ I+ DD+MD S+ RRG PCW++   VG+T A ND+L+I ++++  LK +
Sbjct: 157 LGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AINDALMIENAMYAILKKH 215

Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYN 398
           F     Y+ + ELF+E  + T+ GQ LD +  NR    S FT++              + 
Sbjct: 216 FSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFY 273

Query: 397 LPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 218
           LP +L L LA   D + ++ ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC
Sbjct: 274 LPFALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKC 333

Query: 217 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 38
           +WLAV A+QR    Q+ +   CYG  EPA VER+K LY++L LP  Y   E+  Y+ I  
Sbjct: 334 SWLAVVAMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKT 393

Query: 37  QIE 29
            I+
Sbjct: 394 HIQ 396


>AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-PA
           protein.
          Length = 419

 Score =  221 bits (539), Expect = 1e-57
 Identities = 105/243 (43%), Positives = 151/243 (62%)
 Frame = -1

Query: 757 LGWCVEMFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 578
           LGWCVEM Q++ I+ DD+MD S+ RRG PCW++   VG+T A ND+L+I ++++  LK +
Sbjct: 157 LGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AINDALMIENAMYAILKKH 215

Query: 577 FRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYN 398
           F     Y+ + ELF+E  + T+ GQ LD +  NR    S FT++              + 
Sbjct: 216 FSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFY 273

Query: 397 LPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 218
           LP +L L LA   D + ++ ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC
Sbjct: 274 LPFALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKC 333

Query: 217 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 38
           +WLAV A+QR    Q+ +   CYG  EPA VER+K LY++L LP  Y   E+  Y+ I  
Sbjct: 334 SWLAVVAMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKT 393

Query: 37  QIE 29
            I+
Sbjct: 394 HIQ 396


>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
            protein.
          Length = 4899

 Score = 32.7 bits (71), Expect = 0.56
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +3

Query: 561  LGLVLKLVFRNSNKELCIKRESLKAHVMPTSGRRYQQGMPRRTLEPSIMSSXTMQYA*NI 740
            +G ++++ F     EL +K+ SL+A +MPT  +  Q  +    +  + +   T+  A + 
Sbjct: 2517 IGQIMEMGFTRRTVELALKQLSLQAEIMPTPEQIVQWILEHPDVCANTIEEDTLPLASSA 2576

Query: 741  STHHP 755
            S+H P
Sbjct: 2577 SSHDP 2581


>AY069353-1|AAL39498.1|  696|Drosophila melanogaster LD05963p
           protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 255 LVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVMVAVNQHM 127
           +++L +IY   NV G QF  C     H  QY+     A N  +
Sbjct: 423 VLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQL 465


>AE014134-2323|AAF53277.1|  696|Drosophila melanogaster CG6116-PA
           protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 255 LVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVMVAVNQHM 127
           +++L +IY   NV G QF  C     H  QY+     A N  +
Sbjct: 423 VLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQL 465


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,004,503
Number of Sequences: 53049
Number of extensions: 687444
Number of successful extensions: 1770
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1762
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)